RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C6orf118Q5T5N4 469 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 NAPEPLDQ6IQ20 393 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 WDR59Q6PJI9 974 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 LRRC31Q6UY01 552 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 DPY19L3Q6ZPD9 716 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 DSG4Q86SJ6 1040 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 TRIM69Q86WT6 500 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 MARCH9Q86YJ5 346 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 KDF1Q8NAX2 398 aaPredicted RBP15.44■□□□□ 0.06
UBXN4-203ENST00000416538 C3orf20Q8ND61 904 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 BAP1Q92560 729 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 SERAC1Q96JX3 654 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 PCMTD1Q96MG8 357 aaPredicted RBP15.44■□□□□ 0.06
UBXN4-203ENST00000416538 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 TAS2R14Q9NYV8 317 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 ADAM22Q9P0K1 906 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 PPARGC1AQ9UBK2 798 aaKnown RBP15.44■□□□□ 0.06
UBXN4-203ENST00000416538 FCF1Q9Y324 198 aaKnown RBP15.44■□□□□ 0.06
UBXN4-203ENST00000416538 PCDHB9Q9Y5E1 797 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 ZFYVE26Q68DK2 2539 aa15.44■□□□□ 0.06
UBXN4-203ENST00000416538 FAM208BQ5VWN6 2430 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3DA0A087WVF3 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3IA0A087WXS9 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3EA0A087X179 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3KA0A087X1G2 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3FA6NER0 549 aaPredicted RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3LB9A6J9 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 CCP110O43303 1012 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TRIM16O95361 564 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 CAPNS1P04632 268 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TPM2P07951 284 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3HP0C7X1 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 NSFP46459 744 aaKnown RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 C21orf59P57076 290 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 NXPH1P58417 271 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 RPL7AP62424 266 aaKnown RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 OGDHQ02218 1023 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 SFSWAPQ12872 951 aaKnown RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 PPP1R15BQ5SWA1 713 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 FAM46CQ5VWP2 391 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3GQ6DHY5 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3CQ6IPX1 549 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 STRADAQ7RTN6 431 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 KANSL1Q7Z3B3 1105 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 DNAAF5Q86Y56 855 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D3Q8IZP1 549 aaPredicted RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 PYROXD2Q8N2H3 581 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 RHBDD1Q8TEB9 315 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 ELF4Q99607 663 aaPredicted RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 MYOCQ99972 504 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 SPON2Q9BUD6 331 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 NOL6Q9H6R4 1146 aaKnown RBP15.43■□□□□ 0.06
UBXN4-203ENST00000416538 ATP13A1Q9HD20 1204 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 OR12D3Q9UGF7 316 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 FREM2Q5SZK8 3169 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 KNTC1P50748 2209 aa15.43■□□□□ 0.06
UBXN4-203ENST00000416538 ANKRD11Q6UB99 2663 aaPredicted RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 KPNA3O00505 521 aaPredicted RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 KRT3P12035 628 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 PRLRP16471 622 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 GPD1P21695 349 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 EPHA8P29322 1005 aaPredicted RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 LRSAM1Q6UWE0 723 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 ZNF783Q6ZMS7 281 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 TMEM145Q8NBT3 493 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 ZCCHC14Q8WYQ9 949 aaKnown RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 KLK6Q92876 244 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 MCEEQ96PE7 176 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 AGPAT1Q99943 283 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 OSBPL2Q9H1P3 480 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 FZD3Q9NPG1 666 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 TMEM248Q9NWD8 314 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 DNAI1Q9UI46 699 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 ZFR2Q9UPR6 939 aaKnown RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 LRP4O75096 1905 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 DMXL2Q8TDJ6 3036 aa15.42■□□□□ 0.06
UBXN4-203ENST00000416538 COL27A1Q8IZC6 1860 aaPredicted RBP15.42■□□□□ 0.06
UBXN4-203ENST00000416538 GOLGA8CPA6NN73 597 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 SPINT1O43278 529 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 RNGTTO60942 597 aaKnown RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 LEFTY1O75610 366 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 GKP32189 559 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 GRK6P43250 576 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 SCAPQ12770 1279 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 ARSIQ5FYB1 569 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 ACBD5Q5T8D3 534 aaPredicted RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 RWDD4Q6NW29 188 aaKnown RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 LEKR1Q6ZMV7 388 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 IRF2BP2Q7Z5L9 587 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 TMIEQ8NEW7 156 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 ANKRD20A12PQ8NF67 263 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 OR6K2Q8NGY2 324 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 SAP25Q8TEE9 199 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 SPOCK2Q92563 424 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 ARHGEF2Q92974 986 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms