RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 CDY1Q9Y6F8 540 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 PHGDHO43175 533 aaKnown RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 TRIM13O60858 407 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 KLHL2O95198 593 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 VAPBO95292 243 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 ALOX15P16050 662 aaPredicted RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 AVPR1AP37288 418 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 PTDSS1P48651 473 aaKnown RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 GPR15P49685 360 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 PAPOLAP51003 745 aaKnown RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 SEPT6Q14141 434 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 DDR2Q16832 855 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 NAPRTQ6XQN6 538 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 KDELC2Q7Z4H8 507 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBA3-203ENST00000415609 SCYL1Q96KG9 808 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 LBHD1Q9BQE6 289 aaPredicted RBP12.55□□□□□ -0.4
UBA3-203ENST00000415609 ZCWPW1Q9H0M4 648 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 OSER1Q9NX31 292 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
UBA3-203ENST00000415609 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TMEM114B3SHH9 223 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TK2O00142 265 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 INPPL1O15357 1258 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 SIN3BO75182 1162 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 H2AFYO75367 372 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 CIB2O75838 187 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 PSMG1O95456 288 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 APOA4P06727 396 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 PGGT1BP53609 377 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 MPP1Q00013 466 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 USP4Q13107 963 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 THOC5Q13769 683 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 PCSK7Q16549 785 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 UGP2Q16851 508 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 DENND5AQ6IQ26 1287 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ESRP1Q6NXG1 681 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 SLC41A1Q8IVJ1 513 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 DENND6AQ8IWF6 608 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 SCUBE1Q8IWY4 988 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ZNF781Q8N8C0 355 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 GPATCH11Q8N954 259 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 AGR3Q8TD06 166 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ANKRD27Q96NW4 1050 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 THTPAQ9BU02 230 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 CDH19Q9H159 772 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ATXN3LQ9H3M9 355 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ENTPD7Q9NQZ7 604 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 PLA2G4CQ9UP65 541 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TCAF1Q9Y4C2 921 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 FRMPD3Q5JV73 1810 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 ZNF195O14628 629 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TM7SF2O76062 418 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 AHSGP02765 367 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 CKBP12277 381 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 NCF2P19878 526 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 GRK4P32298 578 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ADRA1AP35348 466 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 CHRNA4P43681 627 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 GLRBP48167 497 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TM4SF4P48230 202 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 CTBP1Q13363 440 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 C6orf163Q5TEZ5 329 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 AFMIDQ63HM1 303 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 POTEHQ6S545 545 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TFAP2DQ7Z6R9 452 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 ULK2Q8IYT8 1036 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 SLC2A6Q9UGQ3 507 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
UBA3-203ENST00000415609 TLR6Q9Y2C9 796 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 SQORQ9Y6N5 450 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 MYLKQ15746 1914 aa12.54□□□□□ -0.4
UBA3-203ENST00000415609 TMEM88BA6NKF7 163 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 OAZ2O95190 189 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms