RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SLCO3A1Q9UIG8 710 aa2.71□□□□□ -1.98
MCF2-204ENST00000414978 SLC25A13Q9UJS0 675 aa2.71□□□□□ -1.98
MCF2-204ENST00000414978 SLC27A6Q9Y2P4 619 aa2.71□□□□□ -1.98
MCF2-204ENST00000414978 USP15Q9Y4E8 981 aaPredicted RBP2.71□□□□□ -1.98
MCF2-204ENST00000414978 RALGAPA2Q2PPJ7 1873 aa2.71□□□□□ -1.98
MCF2-204ENST00000414978 A0A1W2PR77 199 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 K7EPI3 171 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 GRM8O00222 908 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TSPAN4O14817 238 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ADAMTS4O75173 837 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SLC43A1O75387 559 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZWINTO95229 277 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ACP5P13686 325 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ATP6V1B1P15313 513 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TFEBP19484 476 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CRHR1P34998 444 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 PTPN9P43378 593 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 GCLCP48506 637 aaPredicted RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 GZMKP49863 264 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MRPS5P82675 430 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 GBE1Q04446 702 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZNF792Q3KQV3 632 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CC2D1BQ5T0F9 858 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 HIST2H2BCQ6DN03 193 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 HIST2H2BDQ6DRA6 164 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SERPINA13PQ6UXR4 307 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 DPP8Q6V1X1 898 aaPredicted RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 MOB3CQ70IA8 216 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 PARS2Q7L3T8 475 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZER1Q7Z7L7 766 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 NPAS3Q8IXF0 933 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZNF34Q8IZ26 560 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 FIBINQ8TAL6 211 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 WDR60Q8WVS4 1066 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 RABGGTAQ92696 567 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ARRDC3Q96B67 414 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ELMOD3Q96FG2 381 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 VMP1Q96GC9 406 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 OR14A2Q96R54 314 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 FIZ1Q96SL8 496 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SCNM1Q9BWG6 230 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 POLR1BQ9H9Y6 1135 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 POLKQ9UBT6 870 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 LAMP5Q9UJQ1 280 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CLCA2Q9UQC9 943 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 NR2E1Q9Y466 385 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CCL27Q9Y4X3 112 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TANC1Q9C0D5 1861 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ABCC4O15439 1325 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 NPIPB15A6NHN6 443 aaPredicted RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 LEFTY2O00292 366 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 PSMD14O00487 310 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MUSKO15146 869 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TADA2AO75478 443 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 PSMD10O75832 226 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 KLHL18O94889 574 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 RNASE1P07998 156 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 NF2P35240 595 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TOB1P50616 345 aaPredicted RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 PDE1AP54750 535 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SLC12A3P55017 1021 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CLRN1P58418 232 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 STK4Q13043 487 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SEC23BQ15437 767 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TRIM71Q2Q1W2 868 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 GRHL2Q6ISB3 625 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MSANTD2Q6P1R3 559 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SLC30A9Q6PML9 568 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MIB1Q86YT6 1006 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 LRRC71Q8N4P6 559 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ETNPPLQ8TBG4 499 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 R3HDM4Q96D70 268 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CMTM3Q96MX0 182 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 GNRHR2Q96P88 292 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 IWS1Q96ST2 819 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SLC46A2Q9BY10 475 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 TEX101Q9BY14 249 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 OPA3Q9H6K4 179 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 KAT14Q9H8E8 782 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 RAB9BQ9NP90 201 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SNX15Q9NRS6 342 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZDHHC8Q9ULC8 765 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 R3HDM2Q9Y2K5 976 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 GDAQ9Y2T3 454 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 DTNAQ9Y4J8 743 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 KCNE2Q9Y6J6 123 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SIP14410 1827 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 TAF4O00268 1085 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 CTDSP2O14595 271 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ZNF185O15231 689 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 KNG1P01042 644 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 AFPP02771 609 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 CLEC3BP05452 202 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 SELLP14151 372 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 PFKLP17858 780 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 ITGALP20701 1170 aa2.7□□□□□ -1.98
MCF2-204ENST00000414978 MRPL12P52815 198 aaKnown RBP2.7□□□□□ -1.98
MCF2-204ENST00000414978 CDH15P55291 814 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms