RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PIWIL4Q7Z3Z4 852 aaKnown RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 DAW1Q8N136 415 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 OR8D1Q8WZ84 308 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CEP19Q96LK0 163 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 CSPG4P5Q96PW8 444 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 TRMOQ9BU70 441 aa12.13□□□□□ -0.47
PTPRF-205ENST00000414879 SAE1Q9UBE0 346 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-205ENST00000414879 SNTNA6NMZ2 147 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ENDOD1O94919 500 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 NUDT2P50583 147 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TAS2R40P59535 323 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 GPSM1Q86YR5 675 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ZNF655Q8N720 491 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TADA1Q96BN2 335 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 C11orf84Q9BUA3 381 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ARMC7Q9H6L4 198 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 C5orf60A6NFR6 353 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ARIH2O95376 493 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 KELP23276 732 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 GABRR2P28476 465 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 SERPINB5P36952 375 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 AMIGO3Q86WK7 504 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 RASAL3Q86YV0 1011 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TMEM120AQ9BXJ8 343 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 GLRBP48167 497 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 SLC5A3P53794 718 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 NCALDP61601 193 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 BMPR2Q13873 1038 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 RASA2Q15283 850 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TRMT11Q7Z4G4 463 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 DNAAF5Q86Y56 855 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 GFM2Q969S9 779 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 OPTCQ9UBM4 332 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 THSD7AQ9UPZ6 1657 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 A0A1B0GVM2 712 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 F8W810 466 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 BGNP21810 368 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 NDUFV1P49821 464 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 RFTN1Q14699 578 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 DDR2Q16832 855 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 KIAA0408Q6ZU52 694 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 CYP4Z1Q86W10 505 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 MRPL57Q9BQC6 102 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 THUMPD3Q9BV44 507 aaKnown RBP12.12□□□□□ -0.47
PTPRF-205ENST00000414879 PCDHB1Q9Y5F3 818 aa12.12□□□□□ -0.47
PTPRF-205ENST00000414879 LRCH4O75427 683 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ACADSP16219 412 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ADSSP30520 456 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DAOAP59103 153 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DUSP4Q13115 394 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 CLEC4FQ8N1N0 589 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 JOSD2Q8TAC2 188 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DQX1Q8TE96 717 aaKnown RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SLC25A23Q9BV35 468 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SLC28A3Q9HAS3 691 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 EIF2B3Q9NR50 452 aaKnown RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 MPP6Q9NZW5 540 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ERVK-10P10266 1014 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 CORO7P57737 925 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 FBXW4P57775 412 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 NR6A1Q15406 480 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 MILR1Q7Z6M3 343 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 RBFAQ8N0V3 343 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 CCDC33Q8N5R6 958 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 KYQ8NBH2 561 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DTX3LQ8TDB6 740 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PPP1R36Q96LQ0 422 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 C2CD4BA6NLJ0 364 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms