RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
LIMS1-206ENST00000414829 SUMF1Q8NBK3 374 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 KIAA1524Q8TCG1 905 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 GANCQ8TET4 914 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 RUBCNQ92622 972 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 BTBD1Q9H0C5 482 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 CYP8B1Q9UNU6 501 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
LIMS1-206ENST00000414829 ALG6Q9Y672 507 aa14.92□□□□□ -0.02
LIMS1-206ENST00000414829 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 TMCC1O94876 653 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 MT-CO1P00395 513 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 PTMAP06454 111 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 AMPD1P23109 780 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 GLDCP23378 1020 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 KDELR1P24390 212 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 HSPA9P38646 679 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 PSMD8P48556 350 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 PAPOLAP51003 745 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 RHOAP61586 193 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 RPL6Q02878 288 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 TFDP2Q14188 446 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 PLK5Q496M5 336 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 ANKRD20A8PQ5CZ79 823 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 SYCP2LQ5T4T6 812 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 BZW1Q7L1Q6 419 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 KATNAL2Q8IYT4 538 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 NPWQ8N729 165 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 TMIEQ8NEW7 156 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 CADM4Q8NFZ8 388 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 OR2AP1Q8NGE2 309 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 OR2A12Q8NGT7 310 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 CELF6Q96J87 481 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 OMDQ99983 421 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 HINFPQ9BQA5 517 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 DESI2Q9BSY9 194 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 DUSP15Q9H1R2 295 aaPredicted RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 IL36AQ9UHA7 158 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 IPO11Q9UI26 975 aaKnown RBP14.91□□□□□ -0.02
LIMS1-206ENST00000414829 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
LIMS1-206ENST00000414829 MACROD2A1Z1Q3 448 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 MIF4GDA9UHW6 222 aaKnown RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 APOL1O14791 398 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 BNIP3LO60238 219 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 GFRA3O60609 400 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 CHRNA3P32297 505 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 SLC8A1P32418 973 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 NUMBP49757 651 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 DNA2P51530 1060 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 RENBPP51606 427 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 SRSF5Q13243 272 aaKnown RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 PAFAH1B3Q15102 231 aaKnown RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 CARD16Q5EG05 197 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 LYSMD4Q5XG99 296 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 ZNF662Q6ZS27 426 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 ZSCAN30Q86W11 494 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 CACUL1Q86Y37 369 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 ARHGAP12Q8IWW6 846 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 FAM160A2Q8N612 972 aaPredicted RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 UBL4BQ8N7F7 174 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 RLN3Q8WXF3 142 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 HEPHQ9BQS7 1158 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 CINPQ9BW66 212 aaPredicted RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 SLC39A8Q9C0K1 460 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 LACRTQ9GZZ8 138 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 KLC2Q9H0B6 622 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 KDM4CQ9H3R0 1056 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 PDFQ9HBH1 243 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 KLHL11Q9NVR0 708 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 FBXL12Q9NXK8 326 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 SEPT3Q9UH03 358 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
LIMS1-206ENST00000414829 FCF1Q9Y324 198 aaKnown RBP14.9□□□□□ -0.02
LIMS1-206ENST00000414829 RCCD1A6NED2 376 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 LRRC72A6NJI9 287 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 K7ERQ8 282 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 MID1O15344 667 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 PALMO75781 387 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 RNASEH2AO75792 299 aaKnown RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 EPN2O95208 641 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 POP4O95707 220 aaKnown RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 CD48P09326 243 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 VAV1P15498 845 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 COPS2P61201 443 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF33AQ06730 810 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 TFDP3Q5H9I0 405 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 WDR45BQ5MNZ6 344 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 NCBP2-AS2Q69YL0 99 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 CYP2U1Q7Z449 544 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 RCOR2Q8IZ40 523 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 EXD1Q8NHP7 514 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms