RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CCNCP24863 283 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 HADHAP40939 763 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 CYP4F8P98187 520 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 GNA12Q03113 381 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 MPP3Q13368 585 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 ZKSCAN8Q15776 578 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 DAB2IPQ5VWQ8 1189 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SYPL2Q5VXT5 272 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 NPNTQ6UXI9 565 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 CCDC185Q8N715 623 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 CMASQ8NFW8 434 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SH3RF2Q8TEC5 729 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 WFIKKN2Q8TEU8 576 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 ING5Q8WYH8 240 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 TTC17Q96AE7 1141 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 MTBPQ96DY7 904 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 EGFL8Q99944 293 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 CEP41Q9BYV8 373 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 IL22Q9GZX6 179 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 LZTS1Q9Y250 596 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 MRPS17Q9Y2R5 130 aaKnown RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SBF1O95248 1867 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 CCDC195A0A1B0GUA6 201 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 TRDMT1O14717 391 aaKnown RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 MAP3K7O43318 606 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 HCRTO43612 131 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SERPINH1P50454 418 aaKnown RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 NEK2P51955 445 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 DNAJC3Q13217 504 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SLC29A2Q14542 456 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 NXNQ6DKJ4 435 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 KRT73Q86Y46 540 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 TCEAL8Q8IYN2 117 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 VPS37AQ8NEZ2 397 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SEMA3CQ99985 751 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 ZCCHC2Q9C0B9 1178 aaKnown RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 SAE1Q9UBE0 346 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 AGO1Q9UL18 857 aaKnown RBP8.66□□□□□ -1.02
SYNE1-211ENST00000413186 ARL2BPQ9Y2Y0 163 aa8.66□□□□□ -1.02
SYNE1-211ENST00000413186 GREB1LQ9C091 1923 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 GLP2RO95838 553 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CFHP08603 1231 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 MAP4P27816 1152 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 RPL21P46778 160 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CXCR3P49682 368 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 TMPRSS15P98073 1019 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 PPARDQ03181 441 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 NSUN2Q08J23 767 aaKnown RBP eCLIP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SPANXN3Q5MJ09 141 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 AADACL2Q6P093 401 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 BEND5Q7L4P6 421 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 EXT2Q93063 718 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 ELMO2Q96JJ3 720 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 MFSD1Q9H3U5 465 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 RETREG1Q9H6L5 497 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 BCLAF3A2AJT9 711 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 HSPA4LO95757 839 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 PECAM1P16284 738 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 PGAM1P18669 254 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 NFKB1P19838 968 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 RPL22P35268 128 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 RANBP1P43487 201 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 RING1Q06587 406 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CCSAPQ6IQ19 270 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 FAM171BQ6P995 826 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 MTSS1LQ765P7 747 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CFAP52Q8N1V2 620 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 ZCCHC9Q8N567 271 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 ZNF473Q8WTR7 871 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 P2RY11Q96G91 374 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 DRC3Q9H069 523 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CLPBQ9H078 707 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 NKX2-4Q9H2Z4 354 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 TRIM39Q9HCM9 518 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 TDP1Q9NUW8 608 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SLC24A2Q9UI40 661 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 VPS26AO75436 327 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 PFKLP17858 780 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 MLLT6P55198 1093 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 STX1BP61266 288 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SGCGQ13326 291 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 TRIM71Q2Q1W2 868 aaKnown RBP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 TEX44Q53QW1 395 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 KLHL5Q96PQ7 755 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 LGMNQ99538 433 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 CENPKQ9BS16 269 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SUN2Q9UH99 717 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
SYNE1-211ENST00000413186 PCDH8O95206 1070 aa8.65□□□□□ -1.03
SYNE1-211ENST00000413186 ASLP04424 464 aa8.65□□□□□ -1.03
SYNE1-211ENST00000413186 TSHRP16473 764 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms