RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CHRNA3P32297 505 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 ADKP55263 362 aaKnown RBP19.23■□□□□ 0.67
TRIM56-202ENST00000412507 FAM46CQ5VWP2 391 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 KIAA0895LQ68EN5 471 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 NCEH1Q6PIU2 408 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 LEKR1Q6ZMV7 388 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 CYP4V2Q6ZWL3 525 aaPredicted RBP19.23■□□□□ 0.67
TRIM56-202ENST00000412507 ERMP1Q7Z2K6 904 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 ZNF354CQ86Y25 554 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 OR14C36Q8NHC7 312 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 C1orf216Q8TAB5 229 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 BTBD6Q96KE9 485 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 GTPBP2Q9BX10 602 aaKnown RBP19.23■□□□□ 0.67
TRIM56-202ENST00000412507 HPCAL4Q9UM19 191 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 LRRC72A6NJI9 287 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 ARHGAP33O14559 1287 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 TM4SF5O14894 197 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 BCAT2O15382 392 aaPredicted RBP19.22■□□□□ 0.67
TRIM56-202ENST00000412507 FGF10O15520 208 aaPredicted RBP19.22■□□□□ 0.67
TRIM56-202ENST00000412507 CYP1A2P05177 515 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 IGHV4-34P06331 123 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 RECQLP46063 649 aaPredicted RBP19.22■□□□□ 0.67
TRIM56-202ENST00000412507 DNA2P51530 1060 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 ADPRHP54922 357 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 CNTN1Q12860 1018 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 TSR1Q2NL82 804 aaKnown RBP19.22■□□□□ 0.67
TRIM56-202ENST00000412507 UAP1L1Q3KQV9 507 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 DPY19L3Q6ZPD9 716 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 OR2T34Q8NGX1 318 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 NCAPGQ9BPX3 1015 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 CEP44Q9C0F1 390 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 ABHD10Q9NUJ1 306 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 ZNHIT6Q9NWK9 470 aaKnown RBP19.22■□□□□ 0.67
TRIM56-202ENST00000412507 ANAPC7Q9UJX3 599 aa19.22■□□□□ 0.67
TRIM56-202ENST00000412507 EIF3CLB5ME19 914 aaKnown RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 RASA4BC9J798 803 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 RNF103O00237 685 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 RASA4O43374 803 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 KDELR3O43731 214 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 MFAP3LO75121 409 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 SYPP08247 313 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 TCF4P15884 667 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 IL1R2P27930 398 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 HTR7P34969 479 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 PCK1P35558 622 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 ATXN3P54252 364 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 YBEYP58557 167 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 ACAP1Q15027 740 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 SLC18A3Q16572 532 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 ASTE1Q2TB18 679 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 LRRK1Q38SD2 2015 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 CARD16Q5EG05 197 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 PPP6R3Q5H9R7 873 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 SARM1Q6SZW1 724 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 UMODL1-AS1Q8N2C9 162 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 PCDH20Q8N6Y1 951 aaKnown RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 TMIEQ8NEW7 156 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 OR2I1PQ8NGU4 316 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 GRIN3AQ8TCU5 1115 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 ARRDC3Q96B67 414 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 HMCESQ96FZ2 354 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 EIF3CQ99613 913 aaKnown RBP19.21■□□□□ 0.67
TRIM56-202ENST00000412507 CHP1Q99653 195 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 KLC2Q9H0B6 622 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 DEF6Q9H4E7 631 aa19.21■□□□□ 0.67
TRIM56-202ENST00000412507 TDRD6O60522 2096 aaKnown RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3DA0A087WVF3 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3IA0A087WXS9 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3EA0A087X179 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3KA0A087X1G2 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 CXorf51AA0A1B0GTR3 108 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 SSU72P8A0A1W2PR75 194 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3FA6NER0 549 aaPredicted RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3LB9A6J9 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 KPNA3O00505 521 aaPredicted RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 DAPK3O43293 454 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 PRNPP04156 253 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3HP0C7X1 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 CD27P26842 260 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 GEMIN4P57678 1058 aaKnown RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 PIGHQ14442 188 aaPredicted RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 ARSIQ5FYB1 569 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 KCNT1Q5JUK3 1230 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 AGBL4Q5VU57 503 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3GQ6DHY5 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3CQ6IPX1 549 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 PSTKQ8IV42 348 aaKnown RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TBC1D3Q8IZP1 549 aaPredicted RBP19.2■□□□□ 0.66
TRIM56-202ENST00000412507 MINDY1Q8N5J2 469 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 FAM131CQ96AQ9 280 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 ORAI3Q9BRQ5 295 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 PACSIN1Q9BY11 444 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 TM6SF2Q9BZW4 377 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 EBF2Q9HAK2 575 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 IL36AQ9UHA7 158 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 IP6K2Q9UHH9 426 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 WASF2Q9Y6W5 498 aa19.2■□□□□ 0.66
TRIM56-202ENST00000412507 BUB1O43683 1085 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms