RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MTMR11A4FU01 709 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MAGEA13PA6NCF6 341 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 C16orf96A6NNT2 1141 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 E9PLN8 166 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TOR1BO14657 336 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 PPM1GO15355 546 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MAFGO15525 162 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SYNCRIPO60506 623 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RBBP9O75884 186 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SEC14L2O76054 403 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TNFP01375 233 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MBL2P11226 248 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 FCER1AP12319 257 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 IFITM1P13164 125 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF250P15622 560 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 NR2F2P24468 414 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 NPTX2P47972 431 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF41P51814 821 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 VCPP55072 806 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 HERV-K104P61576 105 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RUNX1Q01196 453 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 PAX5Q02548 391 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TNFAIP2Q03169 654 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZBTB16Q05516 673 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 CNTN1Q12860 1018 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TUBB3Q13509 450 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RAPSNQ13702 412 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM187Q14656 261 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 LAGE3Q14657 143 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZRSR2Q15696 482 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF77Q15935 545 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRSS8Q16651 343 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 GLIPR1L2Q4G1C9 344 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 AWAT1Q58HT5 328 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 HYIQ5T013 277 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 UTF1Q5T230 341 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 HCP5Q6MZN7 132 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RETSATQ6NUM9 610 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 HIBCHQ6NVY1 386 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 KSR2Q6VAB6 950 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 Q6ZTK2 550 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TUBA1AQ71U36 451 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MDGA2Q7Z553 956 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 YAF2Q8IY57 180 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLC25A41Q8N5S1 370 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ABHD11Q8NFV4 315 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RP9Q8TA86 221 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RNF138Q8WVD3 245 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RFFLQ8WZ73 363 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TIFAQ96CG3 184 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SERAC1Q96JX3 654 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RUNDC3BQ96NL0 473 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF385AQ96PM9 386 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TM9SF2Q99805 663 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZMAT3Q9HA38 289 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 A4GALTQ9NPC4 353 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 TYW1Q9NV66 732 aaKnown RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 BARHL2Q9NY43 387 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 RPS6KB2Q9UBS0 482 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MALT1Q9UDY8 824 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF107Q9UII5 783 aaPredicted RBP-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 MAFFQ9ULX9 164 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SH2B3Q9UQQ2 575 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 C2CD2Q9Y426 696 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SNX14Q9Y5W7 946 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLC12A7Q9Y666 1083 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 ADGRG4Q8IZF6 3080 aa-1.42□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 A0A0A6YYJ9 748 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGKV2-24A0A0C4DH68 120 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 MDFIC2A0A1B0GVS7 189 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ANKRD34BA5PLL1 514 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 C2CD4BA6NLJ0 364 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 USP27XA6NNY8 438 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 BECN2A8MW95 431 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 HHLA1C9JL84 531 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PSMD14O00487 310 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 MSH4O15457 936 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 IRAK2O43187 625 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF73O43830 326 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 DHX16O60231 1041 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 SUN1O94901 812 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD2P06729 351 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 IL6RP08887 468 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF286BP0CG31 522 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CETPP11597 493 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 NR2C1P13056 603 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD6P30203 668 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CYP2C19P33261 490 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 SERPINB8P50452 374 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CLCN3P51790 818 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 HAP1P54257 671 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLFN5Q08AF3 891 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 FOXO1Q12778 655 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PKP1Q13835 747 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 SAFBQ15424 915 aaKnown RBP eCLIP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF528Q3MIS6 628 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF326Q5BKZ1 582 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRAMEF14Q5SWL7 426 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PDPK2PQ6A1A2 396 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms