RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 THADAQ6YHU6 1953 aa24.3■■□□□ 1.48
UBE2E3-202ENST00000410062 MACROD2A1Z1Q3 448 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 MCF2LO15068 1137 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 MID1O15344 667 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 ZBTB16Q05516 673 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 C11orf74Q86VG3 221 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 TXLNBQ8N3L3 684 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 PCDH20Q8N6Y1 951 aaKnown RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 CHST14Q8NCH0 376 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 FAF2Q96CS3 445 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 CCDC114Q96M63 670 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 PABPC3Q9H361 631 aaKnown RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 PDFQ9HBH1 243 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 SARDHQ9UL12 918 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 C3orf70A6NLC5 250 aaPredicted RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 PRAMEF11O60813 436 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 TMCC1O94876 653 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 SLC8A1P32418 973 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 TTC31Q49AM3 519 aaPredicted RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 NCBP2-AS2Q69YL0 99 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 DPY19L3Q6ZPD9 716 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 TMEFF1Q8IYR6 380 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 DEFB119Q8N690 84 aa24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 RNF25Q96BH1 459 aaPredicted RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 TOE1Q96GM8 510 aaKnown RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 CALR3Q96L12 384 aaKnown RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 DDX56Q9NY93 547 aaKnown RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 FARP1Q9Y4F1 1045 aaPredicted RBP24.29■■□□□ 1.48
UBE2E3-202ENST00000410062 PSTPIP1O43586 416 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 IGLV3-19P01714 112 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 CTSLP07711 333 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 CD6P30203 668 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 SERPINB6P35237 376 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 RECQLP46063 649 aaPredicted RBP24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 METAP1P53582 386 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 RPL6Q02878 288 aaKnown RBP24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 ELF2Q15723 593 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 ODF2Q5BJF6 829 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 CARD16Q5EG05 197 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 PMS2CLQ68D20 193 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 DSG4Q86SJ6 1040 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 PQLC3Q8N755 202 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 GANCQ8TET4 914 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 ISG20Q96AZ6 181 aaKnown RBP24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 SP110Q9HB58 689 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 UBA2Q9UBT2 640 aaPredicted RBP24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 SERGEFQ9UGK8 458 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 PPM1HQ9ULR3 514 aa24.28■■□□□ 1.48
UBE2E3-202ENST00000410062 A0A1W2PP55 124 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 GRID2IPA4D2P6 1211 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 ALOX15BO15296 676 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 MFSD11O43934 449 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 GFRA3O60609 400 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 RHOBTB1O94844 696 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 CHRNA3P32297 505 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 MARCKSL1P49006 195 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 POM121L1PQ3SYA9 428 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 INO80DQ53TQ3 878 aaPredicted RBP24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 LAIR1Q6GTX8 287 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 SLC36A4Q6YBV0 504 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 PIP4K2CQ8TBX8 421 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 KIAA1524Q8TCG1 905 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 GRIN3AQ8TCU5 1115 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 RNF157Q96PX1 679 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 FBXL12Q9NXK8 326 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 WSB2Q9NYS7 404 aaPredicted RBP24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 IPO11Q9UI26 975 aaKnown RBP24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 SCML1Q9UN30 329 aa24.27■■□□□ 1.48
UBE2E3-202ENST00000410062 RNF103O00237 685 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 NDUFS2O75306 463 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 ADH1BP00325 375 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 OXTRP30559 389 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 CCNHP51946 323 aaPredicted RBP24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 NUMA1Q14980 2115 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 PAFAH1B3Q15102 231 aaKnown RBP24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 CYTH1Q15438 398 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 ATXN7L2Q5T6C5 722 aaPredicted RBP24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 ARMCX6Q7L4S7 300 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 LPCAT2Q7L5N7 544 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 AADATQ8N5Z0 425 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 LRRC57Q8N9N7 239 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 OR6K2Q8NGY2 324 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 CASKIN2Q8WXE0 1202 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 ANP32BQ92688 251 aaKnown RBP24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 KRT35Q92764 455 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 IL36AQ9UHA7 158 aa24.26■■□□□ 1.47
UBE2E3-202ENST00000410062 MAP3K6O95382 1288 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 C5AR1P21730 350 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ACSL1P33121 698 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 IL10RBQ08334 325 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ARSIQ5FYB1 569 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 MFSD7Q6UXD7 560 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 RYBPQ8N488 228 aaPredicted RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 HDDC3Q8N4P3 179 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 OMDQ99983 421 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 GPR174Q9BXC1 333 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 NCDNQ9UBB6 729 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 NCKAP1Q9Y2A7 1128 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 OTOGLQ3ZCN5 2332 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms