RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NUDT2P50583 147 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 RAB27AP51159 221 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 PEX6Q13608 980 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 ITGA7Q13683 1181 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 SNX17Q15036 470 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 PM20D1Q6GTS8 502 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 BNC2Q6ZN30 1099 aaPredicted RBP16.96■□□□□ 0.3
LIMS2-208ENST00000410011 EP400NLQ6ZTU2 488 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 CNTD1Q8N815 330 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 ULBP1Q9BZM6 244 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 Q9H521 79 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 MRM3Q9HC36 420 aaKnown RBP16.96■□□□□ 0.3
LIMS2-208ENST00000410011 VCX3AQ9NNX9 186 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 RNF19AQ9NV58 838 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 PIN4Q9Y237 131 aaKnown RBP16.96■□□□□ 0.3
LIMS2-208ENST00000410011 INPP5FQ9Y2H2 1132 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 DTNAQ9Y4J8 743 aa16.96■□□□□ 0.3
LIMS2-208ENST00000410011 ZNF638Q14966 1978 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 GOLGA8QA0A0J9YX86 632 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 GOLGA8OA6NCC3 632 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 YJEFN3A6XGL0 299 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 GOLGA8NF8WBI6 632 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 DDNO94850 711 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 PIGNO95427 931 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 F2P00734 622 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SMIM10L2AP0DMW4 78 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SMIM10L2BP0DMW5 78 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 MPSTP25325 297 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 NMBRP28336 390 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SERPINB5P36952 375 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 MAP3K7CLP57077 242 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 ADAM17P78536 824 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 PCID2Q5JVF3 399 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 ARMC3Q5W041 872 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SNX32Q86XE0 403 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 TICAM1Q8IUC6 712 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 ADCY4Q8NFM4 1077 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 WDR55Q9H6Y2 383 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 GOLGA2P5Q9HBQ8 144 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 CPSF2Q9P2I0 782 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 AAR2Q9Y312 384 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 AIM2O14862 343 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SLC35E2BP0CK96 405 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 COG7P83436 770 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 SMAD1Q15797 465 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 TMC7Q7Z402 723 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 PTCD2Q8WV60 388 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 MAELQ96JY0 434 aaKnown RBP16.95■□□□□ 0.3
LIMS2-208ENST00000410011 EFCAB1Q9HAE3 211 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 CDYLQ9Y232 598 aa16.95■□□□□ 0.3
LIMS2-208ENST00000410011 PLXNB2O15031 1838 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 NPHS1O60500 1241 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 RTN3O95197 1032 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 HSPA1AP0DMV8 641 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 HSPA1BP0DMV9 641 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 LHX1P48742 406 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 USP10Q14694 798 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 RARS2Q5T160 578 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 PKN3Q6P5Z2 889 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 LSMEM2Q8N112 164 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 TMEM86AQ8N2M4 240 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 FSTL5Q8N475 847 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 SMG8Q8ND04 991 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 HIPK4Q8NE63 616 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 CDRT15Q96T59 188 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 ZDHHC2Q9UIJ5 367 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 RUVBL2Q9Y230 463 aaKnown RBP16.94■□□□□ 0.3
LIMS2-208ENST00000410011 ACOT9Q9Y305 439 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 IPPQ9Y573 584 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 PTCH2Q9Y6C5 1203 aa16.94■□□□□ 0.3
LIMS2-208ENST00000410011 TK2O00142 265 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 SRGAP2BP0DMP2 458 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 NCAM1P13591 858 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 EPHA3P29320 983 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 PSMD8P48556 350 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 NAGLUP54802 743 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-208ENST00000410011 CENPLQ8N0S6 344 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-208ENST00000410011 TMEM40Q8WWA1 233 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 MAML3Q96JK9 1138 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 GPR78Q96P69 363 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 PPP1R2P1Q96PQ5 205 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 PPP1R10Q96QC0 940 aaKnown RBP16.93■□□□□ 0.3
LIMS2-208ENST00000410011 APBA2Q99767 749 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 SMOQ99835 787 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 WDCPQ9H6R7 721 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 DDIT4Q9NX09 232 aa16.93■□□□□ 0.3
LIMS2-208ENST00000410011 UTP6Q9NYH9 597 aaKnown RBP16.93■□□□□ 0.3
LIMS2-208ENST00000410011 PLK2Q9NYY3 685 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms