RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 OR8D1Q8WZ84 308 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 VOPP1Q96AW1 172 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PDLIM2Q96JY6 352 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 SPACA7Q96KW9 195 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 RNF157Q96PX1 679 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 DDX56Q9NY93 547 aaKnown RBP22.79■■□□□ 1.24
PTCD3-203ENST00000409783 SARDHQ9UL12 918 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 PPM1HQ9ULR3 514 aa22.79■■□□□ 1.24
PTCD3-203ENST00000409783 TNRC6BQ9UPQ9 1833 aaKnown RBP22.79■■□□□ 1.24
PTCD3-203ENST00000409783 LRRD1A4D1F6 860 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 GRID2IPA4D2P6 1211 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 RNF103O00237 685 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 DFFAO00273 331 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 KRT1P04264 644 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 CTSLP07711 333 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 TNNT1P13805 278 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 LPAL2Q16609 132 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 TAZQ16635 292 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 PMS2CLQ68D20 193 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 DPY19L3Q6ZPD9 716 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 C11orf74Q86VG3 221 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 PLPP6Q8IY26 295 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 TXLNBQ8N3L3 684 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 CHST14Q8NCH0 376 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 CASKIN2Q8WXE0 1202 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 FAM122AQ96E09 287 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 PABPC3Q9H361 631 aaKnown RBP22.78■■□□□ 1.24
PTCD3-203ENST00000409783 WSB2Q9NYS7 404 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-203ENST00000409783 ZFHX2Q9C0A1 2572 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-203ENST00000409783 SHROOM3Q8TF72 1996 aa22.78■■□□□ 1.24
PTCD3-203ENST00000409783 MID1O15344 667 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 MFSD11O43934 449 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 RNASEH1O60930 286 aaKnown RBP22.77■■□□□ 1.24
PTCD3-203ENST00000409783 TMCC1O94876 653 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 DNTTP04053 509 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 ACADMP11310 421 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 SLC8A1P32418 973 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 METAP1P53582 386 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 CYTH1Q15438 398 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 ZFYVE27Q5T4F4 411 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 KRT35Q92764 455 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 SERGEFQ9UGK8 458 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 IPO11Q9UI26 975 aaKnown RBP22.77■■□□□ 1.24
PTCD3-203ENST00000409783 SCML1Q9UN30 329 aa22.77■■□□□ 1.24
PTCD3-203ENST00000409783 MACROD2A1Z1Q3 448 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 BNIP3LO60238 219 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 CD6P30203 668 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 CHRNA3P32297 505 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 SERPINB6P35237 376 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 PSMD8P48556 350 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 NAP1L1P55209 391 aaKnown RBP22.76■■□□□ 1.23
PTCD3-203ENST00000409783 IL10RBQ08334 325 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 CARD16Q5EG05 197 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 SLC9A4Q6AI14 798 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 LAIR1Q6GTX8 287 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 MFSD7Q6UXD7 560 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 KATNAL2Q8IYT4 538 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 AADATQ8N5Z0 425 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 KIAA1524Q8TCG1 905 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 FAM131CQ96AQ9 280 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 RNF25Q96BH1 459 aaPredicted RBP22.76■■□□□ 1.23
PTCD3-203ENST00000409783 TM6SF2Q9BZW4 377 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 LHX3Q9UBR4 397 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 UBA2Q9UBT2 640 aaPredicted RBP22.76■■□□□ 1.23
PTCD3-203ENST00000409783 WASF2Q9Y6W5 498 aa22.76■■□□□ 1.23
PTCD3-203ENST00000409783 MAFKO60675 156 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 PEX11BO96011 259 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 ADH1BP00325 375 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 GSRP00390 522 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 IL1BP01584 269 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 C5AR1P21730 350 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 OXTRP30559 389 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 CTNNA1P35221 906 aaKnown RBP22.75■■□□□ 1.23
PTCD3-203ENST00000409783 DRD3P35462 400 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 CCNHP51946 323 aaPredicted RBP22.75■■□□□ 1.23
PTCD3-203ENST00000409783 GSE1Q14687 1217 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 TTC31Q49AM3 519 aaPredicted RBP22.75■■□□□ 1.23
PTCD3-203ENST00000409783 SLC36A4Q6YBV0 504 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 USP30Q70CQ3 517 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 DSG4Q86SJ6 1040 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 PLD5Q8N7P1 536 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 TMIEQ8NEW7 156 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 PIP4K2CQ8TBX8 421 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 TOE1Q96GM8 510 aaKnown RBP22.75■■□□□ 1.23
PTCD3-203ENST00000409783 CCDC114Q96M63 670 aa22.75■■□□□ 1.23
PTCD3-203ENST00000409783 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 CDKN2BP42772 138 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 DNA2P51530 1060 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 GBE1Q04446 702 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 GALNT2Q10471 571 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 SLC10A2Q12908 348 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-203ENST00000409783 ZNF662Q6ZS27 426 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 NT5DC3Q86UY8 548 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 TMEFF1Q8IYR6 380 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 RNF10Q8N5U6 811 aaKnown RBP22.74■■□□□ 1.23
PTCD3-203ENST00000409783 OR2AP1Q8NGE2 309 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 LOXL4Q96JB6 756 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 HEPHQ9BQS7 1158 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 SP110Q9HB58 689 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 FBXL12Q9NXK8 326 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms