RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KCNV2Q8TDN2 545 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 UCMAQ8WVF2 138 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 FATE1Q969F0 183 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 TTC17Q96AE7 1141 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 AP1M1Q9BXS5 423 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC8A2Q9UPR5 921 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 R3HDM2Q9Y2K5 976 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 R4GN57 208 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 CFAP69A5D8W1 941 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 CCDC188H7C350 402 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 LIASO43766 372 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 MAFKO60675 156 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 PRAMEF11O60813 436 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 MAP3K6O95382 1288 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 KIR2DL1P43626 348 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SEC13P55735 322 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC20A2Q08357 652 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 AP1B1Q10567 949 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 HSF5Q4G112 596 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC45A4Q5BKX6 768 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 MBLAC2Q68D91 279 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 DARS2Q6PI48 645 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 METTL3Q86U44 580 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 ADIPOR2Q86V24 386 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 TP53INP2Q8IXH6 220 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 CCDC13Q8IYE1 715 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 CAMKK1Q8N5S9 505 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 C12orf50Q8NA57 414 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC35B2Q8TB61 432 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 NKD2Q969F2 451 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 ZNF599Q96NL3 588 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 QKIQ96PU8 341 aaKnown RBP eCLIP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 CIPCQ9C0C6 399 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 HAUS2Q9NVX0 235 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 VPS51Q9UID3 782 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC25A13Q9UJS0 675 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 INTS6Q9UL03 887 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
TSPAN4-208ENST00000409531 ANTXRLA6NF34 631 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 LILRB5O75023 590 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 PHF2O75151 1096 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 TIE1P35590 1138 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 NNMTP40261 264 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 ECT2LQ008S8 904 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 LMNB2Q03252 620 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 RFTN1Q14699 578 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 PRKD1Q15139 912 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 CYP1B1Q16678 543 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 TMCO4Q5TGY1 634 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 HEATR6Q6AI08 1181 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 ZNF572Q7Z3I7 529 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 CCDC33Q8N5R6 958 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 PRELID2Q8N945 189 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 NETO2Q8NC67 525 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 C1orf54Q8WWF1 131 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 CASKIN2Q8WXE0 1202 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 ATG4AQ8WYN0 398 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 MAGOHBQ96A72 148 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 RUNDC3BQ96NL0 473 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 LGMNQ99538 433 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 FAM118BQ9BPY3 351 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 ELOVL2Q9NXB9 296 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 FEZ2Q9UHY8 353 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 DNPEPQ9ULA0 475 aa16.83■□□□□ 0.28
TSPAN4-208ENST00000409531 USP34Q70CQ2 3546 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 BCLAF3A2AJT9 711 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 PDE2AO00408 941 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 NPC1O15118 1278 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 MATN3O15232 486 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 SNAP91O60641 907 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 ZMPSTE24O75844 475 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 ITGAVP06756 1048 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 SRPRAP08240 638 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 DLDP09622 509 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 STIP1P31948 543 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 CHRNA3P32297 505 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 FNTAP49354 379 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 RENBPP51606 427 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 HNRNPDQ14103 355 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 INO80DQ53TQ3 878 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 ARHGAP36Q6ZRI8 547 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 BBS5Q8N3I7 341 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 IL17RCQ8NAC3 791 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 POLR3BQ9NW08 1133 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 UBA2Q9UBT2 640 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 MMP17Q9ULZ9 603 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 PLA2G4CQ9UP65 541 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 ZNF148Q9UQR1 794 aa16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 DRG1Q9Y295 367 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 ZFHX2Q9C0A1 2572 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-208ENST00000409531 CCDC163A0A0D9SF12 145 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 PRRT4C9JH25 899 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 J3KR12 359 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 NEBLO76041 1014 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms