RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 SMPD4Q9NXE4 827 aa10.11□□□□□ -0.79
CUL1-202ENST00000409469 CHD9Q3L8U1 2897 aa10.11□□□□□ -0.79
CUL1-202ENST00000409469 A0A0G2JND7 137 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ALDH1A2O94788 518 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ITGA2BP08514 1039 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 HOXC13P31276 330 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 SLC6A4P31645 630 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 SGSHP51688 502 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 IRF9Q00978 393 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PDE1BQ01064 536 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 DSC2Q02487 901 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PDE1CQ14123 709 aaPredicted RBP10.1□□□□□ -0.79
CUL1-202ENST00000409469 SEPT6Q14141 434 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ITIH4Q14624 930 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 STRA8Q7Z7C7 330 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ZNF683Q8IZ20 524 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
CUL1-202ENST00000409469 PRR11Q96HE9 360 aaPredicted RBP10.1□□□□□ -0.79
CUL1-202ENST00000409469 CLSTN3Q9BQT9 956 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 CYP4F11Q9HBI6 524 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 TMEM39AQ9NV64 488 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PRKAG3Q9UGI9 489 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 N6AMT1Q9Y5N5 214 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 MYLKQ15746 1914 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 C2orf78A6NCI8 922 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
CUL1-202ENST00000409469 DNAJC6O75061 913 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 CD53P19397 219 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 GLDCP23378 1020 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 CCNCP24863 283 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 AVPR1AP37288 418 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 MAGEA9P43362 315 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 MAGEA11P43364 429 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 RPS24P62847 133 aaKnown RBP10.1□□□□□ -0.79
CUL1-202ENST00000409469 PLD1Q13393 1074 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ZNF460Q14592 562 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ARHGEF6Q15052 776 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PLEKHG6Q3KR16 790 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ITPRIPL1Q6GPH6 555 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 BEND5Q7L4P6 421 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 DENND6AQ8IWF6 608 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
CUL1-202ENST00000409469 SPPL2BQ8TCT7 592 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 IGSF21Q96ID5 467 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 EXOC2Q96KP1 924 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 CYP2S1Q96SQ9 504 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 FSD1LQ9BXM9 530 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ZYG11BQ9C0D3 744 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 VPS11Q9H270 941 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 GLOD4Q9HC38 313 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 TXNDC16Q9P2K2 825 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ZNF180Q9UJW8 692 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 TRHDEQ9UKU6 1024 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 ARL2BPQ9Y2Y0 163 aa10.1□□□□□ -0.79
CUL1-202ENST00000409469 MICAL3Q7RTP6 2002 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 MATN3O15232 486 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 TM9SF1O15321 606 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 FGF10O15520 208 aaPredicted RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 TSPAN3O60637 253 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 PEX11BO96011 259 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 OR1E1P30953 314 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 CD86P42081 329 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 RPL10AP62906 217 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 ACTN3Q08043 901 aaPredicted RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 CTBP1Q13363 440 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 CHI3L2Q15782 390 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 ESRP1Q6NXG1 681 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 MSANTD2Q6P1R3 559 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 MARK2Q7KZI7 788 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 OTOP2Q7RTS6 562 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 YTHDF3Q7Z739 585 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 KCNMB4Q86W47 210 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 SPATS2Q86XZ4 545 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 DENND1CQ8IV53 801 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 SPATA6LQ8N4H0 392 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 APBB2Q92870 758 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 ERP27Q96DN0 273 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 VMP1Q96GC9 406 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 TBL1YQ9BQ87 522 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 LRRC40Q9H9A6 602 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 KLHL14Q9P2G3 628 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 MTO1Q9Y2Z2 717 aaKnown RBP10.09□□□□□ -0.79
CUL1-202ENST00000409469 PLLPQ9Y342 182 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 GREB1Q4ZG55 1949 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 FAM92AA1XBS5 289 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 AURKAO14965 403 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 MUSKO15146 869 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 CXCL10P02778 98 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 PIRTP0C851 137 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 DHRS4L1P0CG22 281 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 COL6A1P12109 1028 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 IKBKEQ14164 716 aa10.09□□□□□ -0.79
CUL1-202ENST00000409469 USP41Q3LFD5 358 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms