RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 GRID2O43424 1007 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 RNASEH2AO75792 299 aaKnown RBP17.1■□□□□ 0.33
SYNC-202ENST00000409190 EPHX2P34913 555 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 SLC26A2P50443 739 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
SYNC-202ENST00000409190 CSHL1Q14406 222 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 PPP1R3AQ16821 1122 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 INSCQ1MX18 579 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 KLHDC10Q6PID8 442 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 ZBTB46Q86UZ6 589 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 OR9I1Q8NGQ6 314 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 NAT9Q9BTE0 207 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 TRPC7Q9HCX4 862 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 STAP1Q9ULZ2 295 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 COPG1Q9Y678 874 aaKnown RBP17.1■□□□□ 0.33
SYNC-202ENST00000409190 COMMD3-BMI1R4GMX3 469 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 KLHL33A6NCF5 533 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 H3BSA7 217 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 DDNO94850 711 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 AP2A1O95782 977 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 AHSGP02765 367 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 MYL4P12829 197 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 CXCR3P49682 368 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 MYBPC1Q00872 1141 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 CDK18Q07002 472 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 MYLK3Q32MK0 819 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 STRADAQ7RTN6 431 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 SLC45A3Q96JT2 553 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 SNX27Q96L92 541 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 TRIM8Q9BZR9 551 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 PREBQ9HCU5 417 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 DLX3O60479 287 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ME2P23368 584 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 GLDCP23378 1020 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ADRA1BP35368 520 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 PPARGP37231 505 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 ETFBP38117 255 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 LSAMPQ13449 338 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 OGFRL1Q5TC84 451 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 LDB1Q86U70 411 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 ZFP28Q8NHY6 868 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 ZNF512Q96ME7 567 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 PLEKHA5Q9HAU0 1116 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ZDHHC7Q9NXF8 308 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 RAP2CQ9Y3L5 183 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 PCSK6P29122 969 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 CHRNA4P43681 627 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ZDHHC17Q8IUH5 632 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 RYBPQ8N488 228 aaPredicted RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 FAM110BQ8TC76 370 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 LRTOMTQ8WZ04 291 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 WNT8BQ93098 351 aa17.09■□□□□ 0.33
SYNC-202ENST00000409190 ZNF638Q14966 1978 aaKnown RBP17.09■□□□□ 0.33
SYNC-202ENST00000409190 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.33
SYNC-202ENST00000409190 GABRB3P28472 473 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 ADGRE1Q14246 886 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 LIPMQ5VYY2 423 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 CIB1Q99828 191 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 Q9H521 79 aa17.08■□□□□ 0.33
SYNC-202ENST00000409190 MTF2Q9Y483 593 aaPredicted RBP17.08■□□□□ 0.33
SYNC-202ENST00000409190 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.33
SYNC-202ENST00000409190 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
SYNC-202ENST00000409190 SBK3P0C264 359 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 GLUD2P49448 558 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 CDH15P55291 814 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 AGKQ53H12 422 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 STXBP5Q5T5C0 1151 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 EGFL6Q8IUX8 553 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 TMIGD2Q96BF3 282 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 NOS2P35228 1153 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 FAM187BQ17R55 369 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 FBXO48Q5FWF7 155 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 TRIML2Q8N7C3 387 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 TMEM40Q8WWA1 233 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 POMKQ9H5K3 350 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 EFCAB1Q9HAE3 211 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 GIMAP2Q9UG22 337 aa17.08■□□□□ 0.32
SYNC-202ENST00000409190 VILLO15195 856 aa17.07■□□□□ 0.32
SYNC-202ENST00000409190 TIMM44O43615 452 aa17.07■□□□□ 0.32
SYNC-202ENST00000409190 MOCS2O96007 188 aaPredicted RBP17.07■□□□□ 0.32
SYNC-202ENST00000409190 CKMT2P17540 419 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms