RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 FCF1Q9Y324 198 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 ACTL7AQ9Y615 435 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 CEP192Q8TEP8 1941 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 FAM47DPA6NHR8 397 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 C1QTNF3-AMACRE9PGA6 284 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 BUB1O43683 1085 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 CD160O95971 181 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 CFIP05156 583 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 RARAP10276 462 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 CHRNA3P32297 505 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 HCAR3P49019 387 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 ZNF135P52742 658 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 PARP15Q460N3 678 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 PCDH20Q8N6Y1 951 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 NETO1Q8TDF5 533 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 HMCESQ96FZ2 354 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 MIR1-1HGQ9H1L0 117 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 CWC15Q9P013 229 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 NUMA1Q14980 2115 aa18.3■□□□□ 0.52
PDLIM2-206ENST00000409141 ZSCAN5CA6NGD5 496 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 LRRC72A6NJI9 287 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 ZNF821O75541 412 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 FSBPO95073 299 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 GNSP15586 552 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 ERCC2P18074 760 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 NDST2P52849 883 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 METAP1P53582 386 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 SERINC3Q13530 473 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 HADHQ16836 314 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 POM121L1PQ3SYA9 428 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 CARD16Q5EG05 197 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 SLC23A3Q6PIS1 610 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 DPY19L3Q6ZPD9 716 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 CHST14Q8NCH0 376 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 TMIEQ8NEW7 156 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 OR14C36Q8NHC7 312 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 DNASE2BQ8WZ79 361 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 SNX19Q92543 992 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 CELF6Q96J87 481 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 SUSD2Q9UGT4 822 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 EIF2B4Q9UI10 523 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 LCMT1Q9UIC8 334 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 SLC6A14Q9UN76 642 aa18.29■□□□□ 0.52
PDLIM2-206ENST00000409141 LNP1A1A4G5 178 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 H3BRJ5 948 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 PLK4O00444 970 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 PROSCO94903 275 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 PRNPP04156 253 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 CTSLP07711 333 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 SERPINF2P08697 491 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 DRD3P35462 400 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 ARL4AP40617 200 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 DPYSL2Q16555 572 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 TXNRD3NBQ6F5E7 133 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 NCEH1Q6PIU2 408 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 SLC35G2Q8TBE7 412 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 TEKT4Q8WW24 435 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 ISG20Q96AZ6 181 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 EDEM2Q9BV94 578 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 LRRC19Q9H756 370 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 OSGEPQ9NPF4 335 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 IL36AQ9UHA7 158 aa18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-206ENST00000409141 KPNA3O00505 521 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 SLC25A11Q02978 314 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 CNTN1Q12860 1018 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 PUM1Q14671 1186 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 ARSIQ5FYB1 569 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 KIAA0895LQ68EN5 471 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 OR2T34Q8NGX1 318 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 GRIN3AQ8TCU5 1115 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 BIRC7Q96CA5 298 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 HEPHQ9BQS7 1158 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 TM6SF2Q9BZW4 377 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 SLC39A8Q9C0K1 460 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 DLL3Q9NYJ7 618 aa18.27■□□□□ 0.52
PDLIM2-206ENST00000409141 TNRC6BQ9UPQ9 1833 aaKnown RBP18.27■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3DA0A087WVF3 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3IA0A087WXS9 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3EA0A087X179 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3KA0A087X1G2 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3FA6NER0 549 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 ARHGAP42A6NI28 874 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TMEM110-MUSTN1A8MSY1 372 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3LB9A6J9 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 LEFTY1O75610 366 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3HP0C7X1 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 PAPOLAP51003 745 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 DPYSQ14117 519 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 KRT81Q14533 505 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 STPG1Q5TH74 334 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3GQ6DHY5 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3CQ6IPX1 549 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms