RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
HMGA1P7-201ENST00000406908 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
HMGA1P7-201ENST00000406908 TCRBV21S2A2A0A5A6 115 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 GABRG2P18507 467 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 PXNP49023 591 aaPredicted RBP17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 NUBP1P53384 320 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 COPAP53621 1224 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 GNG11P61952 73 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 HS1BP3Q53T59 392 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 STK40Q8N2I9 435 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 CAMKK1Q8N5S9 505 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 OLFM3Q96PB7 478 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 LGMNQ99538 433 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 CEP44Q9C0F1 390 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 MKRN2Q9H000 416 aaKnown RBP17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 SLC6A17Q9H1V8 727 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 CARD9Q9H257 536 aa17.1■□□□□ 0.33
HMGA1P7-201ENST00000406908 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 BNIP3LO60238 219 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 TJP3O95049 919 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 APBB3O95704 486 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 CCNCP24863 283 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 CXCR5P32302 372 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 NR2C2P49116 596 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 SLC10A7Q0GE19 358 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 PDK1Q15118 436 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 ANO7Q6IWH7 933 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 B4GALNT4Q76KP1 1039 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 RASSF3Q86WH2 238 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 TMPRSS6Q8IU80 811 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 PCDH20Q8N6Y1 951 aaKnown RBP17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 CCNYQ8ND76 341 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 OR2T3Q8NH03 318 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 P3H4Q92791 437 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 ISG20Q96AZ6 181 aaKnown RBP17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 WDR24Q96S15 920 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 TM6SF2Q9BZW4 377 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 FBXO4Q9UKT5 387 aa17.09■□□□□ 0.33
HMGA1P7-201ENST00000406908 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.33
HMGA1P7-201ENST00000406908 APOC4-APOC2K7ER74 178 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 APOC2P02655 101 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 NDUFV2P19404 249 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 MSNP26038 577 aaKnown RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 HOXA6P31267 233 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 PPIDQ08752 370 aaKnown RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 KLF1Q13351 362 aaPredicted RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 RFTN1Q14699 578 aaPredicted RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 CARD16Q5EG05 197 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 FAM182AQ5T1J6 154 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 SEL1L2Q5TEA6 688 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 METTL3Q86U44 580 aaKnown RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 SLC13A5Q86YT5 568 aaPredicted RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCDC13Q8IYE1 715 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 CHST14Q8NCH0 376 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 HMGB4Q8WW32 186 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 MAML1Q92585 1016 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 MRGPRX1Q96LB2 322 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF599Q96NL3 588 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 RSPH9Q9H1X1 276 aaPredicted RBP17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 LHX3Q9UBR4 397 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 EBF1Q9UH73 591 aa17.08■□□□□ 0.32
HMGA1P7-201ENST00000406908 MCF2LO15068 1137 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 MUSKO15146 869 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 MATN3O15232 486 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 SP9P0CG40 484 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 C7P10643 843 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 RGRP47804 291 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 FNTBP49356 437 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 RHOAP61586 193 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 RPS14P62263 151 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 HNRNPDQ14103 355 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 NOMO1Q15155 1222 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 ATXN7L2Q5T6C5 722 aaPredicted RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 TIGD7Q6NT04 549 aaPredicted RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 PLPP6Q8IY26 295 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 PGBD3Q8N328 593 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 TEX26Q8N6G2 289 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 TSEN2Q8NCE0 465 aaKnown RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 OR2AP1Q8NGE2 309 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 FATE1Q969F0 183 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 VOPP1Q96AW1 172 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 FAM118BQ9BPY3 351 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms