RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SRSF5Q13243 272 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 GAS6Q14393 721 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 CCNG2Q16589 344 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 C6orf118Q5T5N4 469 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 AFMIDQ63HM1 303 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 IL31Q6EBC2 164 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 CHST9Q7L1S5 443 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 VSIG1Q86XK7 387 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 UMODL1-AS1Q8N2C9 162 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPC3-203ENST00000406757 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 NOA1Q8NC60 698 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 CSGALNACT1Q8TDX6 532 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 MAIP1Q8WWC4 291 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 ARHGEF2Q92974 986 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 ATP2A3Q93084 1043 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 OTUB2Q96DC9 234 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 CHFRQ96EP1 664 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 CCDC114Q96M63 670 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 TMEM121Q9BTD3 319 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 LRRC19Q9H756 370 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 L2HGDHQ9H9P8 463 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 TRPV5Q9NQA5 729 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 ABCB8Q9NUT2 735 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 DNAJC17Q9NVM6 304 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 RNF14Q9UBS8 474 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 INTS6Q9UL03 887 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.53□□□□□ -1.04
GPC3-203ENST00000406757 COL4A2P08572 1712 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 DOCK4Q8N1I0 1966 aa8.53□□□□□ -1.04
GPC3-203ENST00000406757 TICRRQ7Z2Z1 1910 aa8.52□□□□□ -1.04
GPC3-203ENST00000406757 NYNRINQ9P2P1 1898 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 GOLGA6L10A0A0M3HER8 536 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ILVBLA1L0T0 632 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 CTAGE15A4D2H0 777 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CHURC1-FNTBB4DL54 471 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 KCNK1O00180 336 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CBX4O00257 560 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 MCF2LO15068 1137 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 PHF2O75151 1096 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TULP3O75386 442 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ADH1CP00326 375 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CTAGE8P0CG41 777 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ETFBP38117 255 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 OPRD1P41143 372 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 GARSP41250 739 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 FNTBP49356 437 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 NDST2P52849 883 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 OXCT1P55809 520 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 GALNT2Q10471 571 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TUBB2AQ13885 445 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 BYSLQ13895 437 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 SIM2Q14190 667 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 PDK1Q15118 436 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 GEN1Q17RS7 908 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ITPRIPL2Q3MIP1 535 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 FUT11Q495W5 492 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ACBD5Q5T8D3 534 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 TMEM215Q68D42 235 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 LAIR1Q6GTX8 287 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CCDC137Q6PK04 289 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 Q6ZS52 159 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 SETD3Q86TU7 594 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 CTAGE6Q86UF2 777 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 LAPTM4BQ86VI4 370 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CCDC117Q8IWD4 279 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 CTAGE4Q8IX94 777 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CPA6Q8N4T0 437 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ATPAF2Q8N5M1 289 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CEP112Q8N8E3 955 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 FAM71DQ8N9W8 422 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 FIBINQ8TAL6 211 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 CYB5D2Q8WUJ1 264 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TFB1MQ8WVM0 346 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 SORCS1Q8WY21 1168 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ERLEC1Q96DZ1 483 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ALG14Q96F25 216 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 LMLNQ96KR4 655 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 OLFM3Q96PB7 478 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 XPO6Q96QU8 1125 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 FEM1AQ9BSK4 669 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 RTKNQ9BST9 563 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 IER2Q9BTL4 223 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 TUBB2BQ9BVA1 445 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 ATP13A1Q9HD20 1204 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 ZDHHC4Q9NPG8 344 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
GPC3-203ENST00000406757 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
GPC3-203ENST00000406757 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.52□□□□□ -1.05
GPC3-203ENST00000406757 AMACRQ9UHK6 382 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms