RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ALS2CLQ60I27 953 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CEP128Q6ZU80 1094 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TRMT10CQ7L0Y3 403 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 IGDCC3Q8IVU1 814 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 APCDD1Q8J025 514 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 IQCKQ8N0W5 287 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CPXM2Q8N436 756 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 OR52K1Q8NGK4 314 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 IRF7Q92985 503 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 IL12RB2Q99665 862 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GORASP1Q9BQQ3 440 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TRIM56Q9BRZ2 755 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 MLPHQ9BV36 600 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 FSD1LQ9BXM9 530 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 FOXP3Q9BZS1 431 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ABCB8Q9NUT2 735 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 DUS2Q9NX74 493 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 BCCIPQ9P287 314 aaKnown RBP eCLIP3.77□□□□□ -1.81
RTN4-208ENST00000404909 TBC1D14Q9P2M4 693 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 UBA2Q9UBT2 640 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 TRIOO75962 3097 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CCDC78A2IDD5 438 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA6CA6NDK9 693 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ALOX15BO15296 676 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 KDELR3O43731 214 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ATP9BO43861 1147 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 BNIP3LO60238 219 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TBX10O75333 385 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ANXA9O76027 345 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 AP2A1O95782 977 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MT-CO1P00395 513 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CPP00450 1065 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 POU2F2P09086 479 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA6DP0CG33 693 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TYRP14679 529 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TPSB2P20231 275 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SSTR1P30872 391 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SCNN1BP51168 640 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 PPARDQ03181 441 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 LMAN2Q12907 356 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ADAM15Q13444 863 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ADGRE1Q14246 886 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TPSAB1Q15661 275 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 KRT71Q3SY84 523 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 FYB2Q5VWT5 728 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 KCTD16Q68DU8 428 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 C3orf62Q6ZUJ4 267 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 FAM217AQ8IXS0 508 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ADGRG2Q8IZP9 1017 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 BBS5Q8N3I7 341 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MPP5Q8N3R9 675 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SLC25A41Q8N5S1 370 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TTC8Q8TAM2 541 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MAML1Q92585 1016 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SMARCD2Q92925 531 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 RSPRY1Q96DX4 576 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 RPL10LQ96L21 214 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 ASB16Q96NS5 453 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SEMA3CQ99985 751 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CINPQ9BW66 212 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 EPB41L4BQ9H329 900 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 EBF3Q9H4W6 596 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 LRRC4CQ9HCJ2 640 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 XAB2Q9HCS7 855 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 SPHK2Q9NRA0 654 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA6AQ9NYA3 693 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CLEC1BQ9P126 229 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZC3H7BQ9UGR2 993 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZMYM5Q9UJ78 669 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 AAR2Q9Y312 384 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 FCF1Q9Y324 198 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 OBSL1O75147 1896 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 COL6A3P12111 3177 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 HEPACAM2A8MVW5 462 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 H3BQ06 376 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 K7ERQ8 282 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 AGPSO00116 658 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 GFRA2O00451 464 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SLC9A3R1O14745 358 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 MUSKO15146 869 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 TRIM24O15164 1050 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 AGTP01019 485 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MYZAPP0CAP1 466 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 HOXB8P17481 243 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 MGAT1P26572 445 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 HLA-FP30511 346 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MAGEA6P43360 314 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 IFNAR2P48551 515 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 ARF5P84085 180 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CDK16Q00536 496 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 MLLT1Q03111 559 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 ZNF844Q08AG5 666 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 NIPAL4Q0D2K0 466 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 SKIV2LQ15477 1246 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 CCDC85BQ15834 202 aaPredicted RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 LONRF1Q17RB8 773 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 CCDC38Q502W7 563 aa3.77□□□□□ -1.81
RTN4-208ENST00000404909 DNAJC21Q5F1R6 531 aaKnown RBP3.77□□□□□ -1.81
RTN4-208ENST00000404909 TANGO2Q6ICL3 276 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms