RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 EDEM3Q9BZQ6 932 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 KDM4CQ9H3R0 1056 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 TM7SF3Q9NS93 570 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 FZD10Q9ULW2 581 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 SPEGQ15772 3267 aa16.2■□□□□ 0.18
ATG4B-203ENST00000400772 VILLO15195 856 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-203ENST00000400772 SKILP12757 684 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 CTSKP43235 329 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 SIM1P81133 766 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-203ENST00000400772 FOXC1Q12948 553 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 ARSIQ5FYB1 569 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 FIGNQ5HY92 759 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 PIP5KL1Q5T9C9 394 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 SCYL2Q6P3W7 929 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 DCUN1D2Q6PH85 259 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 NAXDQ8IW45 347 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 ARFGAP1Q8N6T3 406 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 CEP44Q9C0F1 390 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 NOL6Q9H6R4 1146 aaKnown RBP16.19■□□□□ 0.18
ATG4B-203ENST00000400772 FCF1Q9Y324 198 aaKnown RBP16.19■□□□□ 0.18
ATG4B-203ENST00000400772 WASF2Q9Y6W5 498 aa16.19■□□□□ 0.18
ATG4B-203ENST00000400772 CXorf51AA0A1B0GTR3 108 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 H0Y8X5 98 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 FTLP02792 175 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-203ENST00000400772 GZMAP12544 262 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 TRIP6Q15654 476 aaKnown RBP16.18■□□□□ 0.18
ATG4B-203ENST00000400772 ZNF423Q2M1K9 1284 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 PPP1R2P3Q6NXS1 205 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 VOPP1Q96AW1 172 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 CCDC114Q96M63 670 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 MAGEH1Q9H213 219 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 PARVAQ9NVD7 372 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 IL36AQ9UHA7 158 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 PCOLCE2Q9UKZ9 415 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
ATG4B-203ENST00000400772 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-203ENST00000400772 PCDHGB2Q9Y5G2 931 aa16.18■□□□□ 0.18
ATG4B-203ENST00000400772 DOCK9Q9BZ29 2069 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 CABIN1Q9Y6J0 2220 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 TMEM131Q92545 1883 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 TMEM191CA6NGB0 347 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 KPNA3O00505 521 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 RAMP2O60895 175 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 LEFTY1O75610 366 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 PRNPP04156 253 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 SPINK2P20155 84 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 CD38P28907 300 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 MAT2AP31153 395 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 UBASH3AP57075 661 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 KLHL30Q0D2K2 578 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 HNRNPDQ14103 355 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 POLD3Q15054 466 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 CARD16Q5EG05 197 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 EFHC2Q5JST6 749 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 PRAMEF14Q5SWL7 426 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 HGSNATQ68CP4 663 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 TRIM69Q86WT6 500 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 PCDH20Q8N6Y1 951 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 RTL3Q8N8U3 475 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 BAHD1Q8TBE0 780 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 SERAC1Q96JX3 654 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 TRIM7Q9C029 511 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 AASDHPPTQ9NRN7 309 aa16.17■□□□□ 0.18
ATG4B-203ENST00000400772 TPRP12270 2363 aaKnown RBP16.17■□□□□ 0.18
ATG4B-203ENST00000400772 A0A1W2PQJ5 194 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 WASH4PA8MWX3 477 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 KDELR3O43731 214 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 CREB3O43889 395 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 PSMA2P25787 234 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 EPHB2P29323 1055 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 ETFBP38117 255 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 DNA2P51530 1060 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 AIF1P55008 147 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 C21orf59P57076 290 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 ZSCAN23Q3MJ62 389 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 LEKR1Q6ZMV7 388 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
ATG4B-203ENST00000400772 PLPP6Q8IY26 295 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 GRIN3AQ8TCU5 1115 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 ISG20Q96AZ6 181 aaKnown RBP16.16■□□□□ 0.18
ATG4B-203ENST00000400772 HEPHQ9BQS7 1158 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 HDAC8Q9BY41 377 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 KLC2Q9H0B6 622 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 ISCUQ9H1K1 167 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 GPATCH2LQ9NWQ4 482 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 CNOT8Q9UFF9 292 aaKnown RBP16.16■□□□□ 0.18
ATG4B-203ENST00000400772 BTBD3Q9Y2F9 522 aa16.16■□□□□ 0.18
ATG4B-203ENST00000400772 PCDHGA12O60330 932 aa16.15■□□□□ 0.18
ATG4B-203ENST00000400772 GKP32189 559 aa16.15■□□□□ 0.18
ATG4B-203ENST00000400772 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-203ENST00000400772 CCNHP51946 323 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-203ENST00000400772 TPM4P67936 248 aa16.15■□□□□ 0.18
ATG4B-203ENST00000400772 IL9RQ01113 521 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms