RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 FKBP1BP68106 108 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 MTF1Q14872 753 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 CDKAL1Q5VV42 579 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 EXOC2Q96KP1 924 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 IL25Q9H293 177 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RAD21L1Q9H4I0 556 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ATP13A3Q9H7F0 1226 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 TELO2Q9Y4R8 837 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 A8MU76 341 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 TPST1O60507 370 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 KLRK1P26718 216 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RPS6KA3P51812 740 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 CNTN2Q02246 1040 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC30A10Q6XR72 485 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 GALNTL5Q7Z4T8 443 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 RELL1Q8IUW5 271 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 CRELD1Q96HD1 420 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 H3BNH8 94 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 CCNDBP1O95273 360 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 STX5Q13190 355 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 ATP1A4Q13733 1029 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 SDHAF4Q5VUM1 108 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 AGGF1Q8N302 714 aaeCLIP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 NOA1Q8NC60 698 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 WWP1Q9H0M0 922 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 PPCSQ9HAB8 311 aa11.11□□□□□ -0.63
CACNA1C-216ENST00000399638 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 BTN3A3O00478 584 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TP73O15350 636 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 GIMD1P0DJR0 217 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FMO4P31512 558 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 MTAPQ13126 283 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 BMPR2Q13873 1038 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 SEMA3AQ14563 771 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 KCNA10Q16322 511 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FBXO42Q6P3S6 717 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 LRRC39Q96DD0 335 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 QRFPRQ96P65 431 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CDH9Q9ULB4 789 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 KIAA1257Q9ULG3 409 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ABRQ12979 859 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CYLC2Q14093 348 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 NR6A1Q15406 480 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 PEG10Q86TG7 708 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 HID1Q8IV36 788 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ADSSL1Q8N142 457 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ISCUQ9H1K1 167 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 NEU2Q9Y3R4 380 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 PSIP1O75475 530 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CCL5P13501 91 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ERCC2P18074 760 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TARSP26639 723 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 POU6F1Q14863 301 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CRY1Q16526 586 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CRELD2Q6UXH1 353 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TUBGCP4Q9UGJ1 667 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF780BQ9Y6R6 833 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 OR6B1O95007 311 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 OR1D2P34982 312 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TIE1P35590 1138 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CBX2Q14781 532 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 HMBOX1Q6NT76 420 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 MYCBPAPQ8TBZ2 947 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 PPP1R10Q96QC0 940 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 MLPHQ9BV36 600 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 C6orf62Q9GZU0 229 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CAB39LQ9H9S4 337 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 MRPS33Q9Y291 106 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 WWP2O00308 870 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ABL2P42684 1182 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 CSHL1Q14406 222 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 PGM5Q15124 567 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 C16orf46Q6P387 395 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 ERGIC2Q96RQ1 377 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 TMEM5Q9Y2B1 443 aa11.1□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF432O94892 652 aa11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 RPP38P78345 283 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-216ENST00000399638 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms