RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 USP39Q53GS9 565 aaKnown RBP18■□□□□ 0.47
CTNS-203ENST00000399306 ZNF776Q68DI1 518 aaPredicted RBP18■□□□□ 0.47
CTNS-203ENST00000399306 ANO7Q6IWH7 933 aa18■□□□□ 0.47
CTNS-203ENST00000399306 TIGD7Q6NT04 549 aaPredicted RBP18■□□□□ 0.47
CTNS-203ENST00000399306 TSSK4Q6SA08 328 aa18■□□□□ 0.47
CTNS-203ENST00000399306 PLD5Q8N7P1 536 aa18■□□□□ 0.47
CTNS-203ENST00000399306 OR8D1Q8WZ84 308 aa18■□□□□ 0.47
CTNS-203ENST00000399306 PRCCQ92733 491 aaPredicted RBP18■□□□□ 0.47
CTNS-203ENST00000399306 SIPA1Q96FS4 1042 aa18■□□□□ 0.47
CTNS-203ENST00000399306 LRIG1Q96JA1 1093 aa18■□□□□ 0.47
CTNS-203ENST00000399306 FAM129BQ96TA1 746 aa18■□□□□ 0.47
CTNS-203ENST00000399306 MKRN2Q9H000 416 aaKnown RBP18■□□□□ 0.47
CTNS-203ENST00000399306 SP110Q9HB58 689 aa18■□□□□ 0.47
CTNS-203ENST00000399306 LZTFL1Q9NQ48 299 aa18■□□□□ 0.47
CTNS-203ENST00000399306 UBA2Q9UBT2 640 aaPredicted RBP18■□□□□ 0.47
CTNS-203ENST00000399306 SPAG17Q6Q759 2223 aa18■□□□□ 0.47
CTNS-203ENST00000399306 hCG_1818297A0A087WSY0 165 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 DFFAO00273 331 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 DDX3YO15523 660 aaKnown RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 SMAD6O43541 496 aaKnown RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 MFSD11O43934 449 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 ZNF821O75541 412 aaPredicted RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 ADH1BP00325 375 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 TNNT1P13805 278 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 CCNCP24863 283 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 HSPA9P38646 679 aaKnown RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 GARSP41250 739 aaKnown RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 RECQLP46063 649 aaPredicted RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 MARCKSL1P49006 195 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 FNTBP49356 437 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 FAM46CQ5VWP2 391 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 LINGO4Q6UY18 593 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 USP30Q70CQ3 517 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 ATPAF2Q8N5M1 289 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 ZNF366Q8N895 744 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 TMIEQ8NEW7 156 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 OR2A12Q8NGT7 310 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 HMGB4Q8WW32 186 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 GAB3Q8WWW8 586 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 HDAC11Q96DB2 347 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 ZNF830Q96NB3 372 aaPredicted RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 ITM2CQ9NQX7 267 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 DTLQ9NZJ0 730 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 USP36Q9P275 1121 aaKnown RBP17.99■□□□□ 0.47
CTNS-203ENST00000399306 BCCIPQ9P287 314 aaKnown RBP eCLIP17.99■□□□□ 0.47
CTNS-203ENST00000399306 AMACRQ9UHK6 382 aa17.99■□□□□ 0.47
CTNS-203ENST00000399306 H0Y858 1186 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 K7ERQ8 282 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 TMCC1O94876 653 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 OXTRP30559 389 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 P2RY2P41231 377 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 NBL1P41271 181 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 CSNK1DP48730 415 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 RENBPP51606 427 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 RPS14P62263 151 aaKnown RBP17.98■□□□□ 0.47
CTNS-203ENST00000399306 SNRPD1P62314 119 aaKnown RBP17.98■□□□□ 0.47
CTNS-203ENST00000399306 NSUN2Q08J23 767 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTNS-203ENST00000399306 DMWDQ09019 674 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 GRM3Q14832 879 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 CARD16Q5EG05 197 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 SPDYCQ5MJ68 293 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 MEI1Q5TIA1 1274 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 Q6ZVU0 165 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 BBS12Q6ZW61 710 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 KBTBD6Q86V97 674 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 RFX6Q8HWS3 928 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 REXO1L1PQ8IX06 675 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 PGBD3Q8N328 593 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 BBS5Q8N3I7 341 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 OR2AP1Q8NGE2 309 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 ALG3Q92685 438 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 HAUS2Q9NVX0 235 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 MFHAS1Q9Y4C4 1052 aa17.98■□□□□ 0.47
CTNS-203ENST00000399306 C1QTNF3-AMACRE9PGA6 284 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 J3KR12 359 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 ZNF189O75820 626 aaPredicted RBP17.97■□□□□ 0.47
CTNS-203ENST00000399306 FTCDO95954 541 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 PEX11BO96011 259 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 DNTTP04053 509 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 PRNPP04156 253 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 ACADMP11310 421 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 C5AR1P21730 350 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
CTNS-203ENST00000399306 GBE1Q04446 702 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 HNRNPDQ14103 355 aaKnown RBP17.97■□□□□ 0.47
CTNS-203ENST00000399306 PDK1Q15118 436 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 CST6Q15828 149 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 TTC31Q49AM3 519 aaPredicted RBP17.97■□□□□ 0.47
CTNS-203ENST00000399306 RALGPS1Q5JS13 557 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 SLC36A4Q6YBV0 504 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 CCDC50Q8IVM0 306 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 STK40Q8N2I9 435 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 TEX26Q8N6G2 289 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 MAML1Q92585 1016 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 SPACA7Q96KW9 195 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 OLFM3Q96PB7 478 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 PSKH2Q96QS6 385 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 OSBPL8Q9BZF1 889 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 KCND1Q9NSA2 647 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms