RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PROCP04070 461 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 CYP2A6P11509 494 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 ATP6V1B1P15313 513 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 RAB10P61026 200 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 CRYMQ14894 314 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 ZBTB49Q6ZSB9 765 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 MILR1Q7Z6M3 343 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 CENPLQ8N0S6 344 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 MIER2Q8N344 545 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 IRGQQ8WZA9 623 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 GFM2Q969S9 779 aaKnown RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 CNBD2Q96M20 576 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 ALG9Q9H6U8 611 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 VPS45Q9NRW7 570 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 USP1O94782 785 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 BOP1Q14137 746 aaKnown RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 FRG1Q14331 258 aaKnown RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 PPP1R15BQ5SWA1 713 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 FAM120BQ96EK7 910 aaKnown RBP14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 CCDC167Q9P0B6 97 aa14.41□□□□□ -0.1
PCDHGA11-201ENST00000398587 LTBP3Q9NS15 1303 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 GNG14A0A1W2PPG7 69 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 BUD23O43709 281 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 KATNA1O75449 491 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ASGR1P07306 291 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 TKTP29401 623 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 GABRB2P47870 512 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 HPCAP84074 193 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 CDK18Q07002 472 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 CYP1B1Q16678 543 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ARHGAP17Q68EM7 881 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ELF3P78545 371 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 INTS6LQ5JSJ4 861 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 RNASEH2BQ5TBB1 312 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ZFP1Q6P2D0 407 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 RIPOR1Q6ZS17 1223 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 USP45Q70EL2 814 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 DENND1CQ8IV53 801 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 RDH11Q8TC12 318 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 CDRT15Q96T59 188 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 HGH1Q9BTY7 390 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 SNX15Q9NRS6 342 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 C15orf38-AP3S2A0A0A6YYH1 394 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 MEI4A8MW99 385 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 PAPSS1O43252 624 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 KIF1CO43896 1103 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 LGR5O75473 907 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 FGF1P05230 155 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 TFEBP19484 476 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 HLA-DPA1P20036 260 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 CNTN1Q12860 1018 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 SAMD4BQ5PRF9 694 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 SLC30A9Q6PML9 568 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ARPINQ7Z6K5 226 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 NETO2Q8NC67 525 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 KCTD15Q96SI1 283 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 MRPL57Q9BQC6 102 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 MPP6Q9NZW5 540 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 PNMA8BQ9ULN7 279 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 HDAC3O15379 428 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 MFSD11O43934 449 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 SNUPNO95149 360 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 TTPAP49638 278 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ANXA11P50995 505 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 MAXP61244 160 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 SMAD3P84022 425 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ADRM1Q16186 407 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 TCHHL1Q5QJ38 904 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 ZNF786Q8N393 782 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 VPS33AQ96AX1 596 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 NSMCE2Q96MF7 247 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 QKIQ96PU8 341 aaKnown RBP eCLIP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 FAM126AQ9BYI3 521 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 STN1Q9H668 368 aaKnown RBP14.4□□□□□ -0.1
PCDHGA11-201ENST00000398587 FKTNO75072 461 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 CES1P23141 567 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 DGKAP23743 735 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ASPAP45381 313 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 SP2Q02086 613 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ARHGAP1Q07960 439 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 TP53BP2Q13625 1128 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 PFKFB4Q16877 469 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ARMC6Q6NXE6 501 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 AFTPHQ6ULP2 937 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 TPGS1Q6ZTW0 290 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 RHOJQ9H4E5 214 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 BAZ2AQ9UIF9 1905 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 HTR7P34969 479 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 SNRPD1P62314 119 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 CREMQ03060 361 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 TBCELQ5QJ74 424 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms