RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NME3Q13232 169 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 AUHQ13825 339 aaKnown RBP10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 RABGAP1LQ5R372 815 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 GBP6Q6ZN66 633 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 PDZD3Q86UT5 571 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 EID2Q8N6I1 236 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 C1orf131Q8NDD1 294 aaKnown RBP10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SAP25Q8TEE9 199 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 OR8D1Q8WZ84 308 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ALG14Q96F25 216 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 CNDP2Q96KP4 475 aaKnown RBP10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SIK2Q9H0K1 926 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 GDF3Q9NR23 364 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ARHGAP20Q9P2F6 1191 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 APEX2Q9UBZ4 518 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 SNX10Q9Y5X0 201 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 HS3ST4Q9Y661 456 aa10.08□□□□□ -0.8
NIFKP1-201ENST00000398317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 HSF2BPO75031 334 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 ERBB2P04626 1255 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 GLI1P08151 1106 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 PNMA6AP0CW24 399 aaPredicted RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC2A3P11169 496 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 PON1P27169 355 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 NXPH1P58417 271 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 CNTN1Q12860 1018 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 DLG2Q15700 870 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 CAMK4Q16566 473 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 EXOC3L4Q17RC7 722 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 EFHC1Q5JVL4 640 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 OLFML1Q6UWY5 402 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 RIPOR1Q6ZS17 1223 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 C11orf57Q6ZUT1 292 aaPredicted RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 PRPF39Q86UA1 669 aaKnown RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 SPATS2Q86XZ4 545 aaKnown RBP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 IRF2BP1Q8IU81 584 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 SHC3Q92529 594 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 LRIG1Q96JA1 1093 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 FAM81BQ96LP2 452 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 FEM1AQ9BSK4 669 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 PLCB1Q9NQ66 1216 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 ASNSD1Q9NWL6 643 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC25A13Q9UJS0 675 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 CA5BQ9Y2D0 317 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 OR51B4Q9Y5P0 310 aa10.07□□□□□ -0.8
NIFKP1-201ENST00000398317 M0QYT0 321 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 FOXN3O00409 490 aaPredicted RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 LATO43561 262 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PLRG1O43660 514 aaKnown RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SNAP91O60641 907 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PAGE1O75459 146 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 DAB1O75553 588 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 RFPL3O75679 317 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 CNTN5O94779 1100 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 ADCY5O95622 1261 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 MT-CO1P00395 513 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 JUPP14923 745 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 ZNF18P17022 549 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 TFE3P19532 575 aaPredicted RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 EPHA8P29322 1005 aaPredicted RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 KRT9P35527 623 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 MTIF2P46199 727 aaKnown RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 OXCT1P55809 520 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 RNASE9P60153 205 aaKnown RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC6A3Q01959 620 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PTPN20Q4JDL3 420 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SOWAHCQ53LP3 525 aaPredicted RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 AGBL4Q5VU57 503 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 OTUD1Q5VV17 481 aaPredicted RBP10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 NAPEPLDQ6IQ20 393 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 DSG4Q86SJ6 1040 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SLC47A2Q86VL8 602 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 TMPRSS12Q86WS5 348 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PIP4K2CQ8TBX8 421 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 KLK6Q92876 244 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 CRELD1Q96HD1 420 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 MYOCQ99972 504 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 MUC3BQ9H195 1237 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SYNCQ9H7C4 482 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 SIX2Q9NPC8 291 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 ANLNQ9NQW6 1124 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 VPS28Q9UK41 221 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PPM1HQ9ULR3 514 aa10.06□□□□□ -0.8
NIFKP1-201ENST00000398317 PTPRQQ9UMZ3 2332 aa10.05□□□□□ -0.8
NIFKP1-201ENST00000398317 C1QTNF3-AMACRE9PGA6 284 aa10.05□□□□□ -0.8
NIFKP1-201ENST00000398317 I6L893 689 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms