RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ALS2CR12Q96Q35 445 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 HEMGNQ9BXL5 484 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 TM6SF2Q9BZW4 377 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 CD93Q9NPY3 652 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 ZSCAN32Q9NX65 697 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 UBA2Q9UBT2 640 aaPredicted RBP25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 INVSQ9Y283 1065 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 R4GN57 208 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 hCG_1818297A0A087WSY0 165 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 MIF4GDA9UHW6 222 aaKnown RBP25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 DDX3YO15523 660 aaKnown RBP25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 TMCC1O94876 653 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 SRSF5Q13243 272 aaKnown RBP25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 ZNF211Q13398 564 aaPredicted RBP25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 ATPAF2Q8N5M1 289 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 RLN3Q8WXF3 142 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 FAM126AQ9BYI3 521 aaPredicted RBP25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 FAM86C1Q9NVL1 165 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 DTLQ9NZJ0 730 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 EML5Q05BV3 1969 aa25.84■■□□□ 1.73
TMEM55B-202ENST00000398020 CST8O60676 142 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 PYGMP11217 842 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 PTPN5P54829 565 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 OR2A12Q8NGT7 310 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 SIPA1Q96FS4 1042 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 FAM129BQ96TA1 746 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 CEP44Q9C0F1 390 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 RSPH9Q9H1X1 276 aaPredicted RBP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 KCNH6Q9H252 994 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 SAE1Q9UBE0 346 aaPredicted RBP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 USP27XA6NNY8 438 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 MAFKO60675 156 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 IL10RBQ08334 325 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 GALNT2Q10471 571 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 ELAVL3Q14576 367 aaKnown RBP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 WDR5BQ86VZ2 330 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 MMAAQ8IVH4 418 aaKnown RBP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 PRCCQ92733 491 aaPredicted RBP25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 HERPUD2Q9BSE4 406 aa25.83■■□□□ 1.73
TMEM55B-202ENST00000398020 SHROOM3Q8TF72 1996 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 CXorf51AA0A1B0GTR3 108 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 GARSP41250 739 aaKnown RBP25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 RPS14P62263 151 aaKnown RBP25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 CYTH1Q15438 398 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 INO80DQ53TQ3 878 aaPredicted RBP25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 DPY19L3Q6ZPD9 716 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 PCDH20Q8N6Y1 951 aaKnown RBP25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 FRMD1Q8N878 549 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 CHST14Q8NCH0 376 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 ZBTB44Q8NCP5 570 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 OR6K2Q8NGY2 324 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 ATOH1Q92858 354 aaPredicted RBP25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 EXOC2Q96KP1 924 aa25.82■■□□□ 1.72
TMEM55B-202ENST00000398020 CCDC163A0A0D9SF12 145 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 TFDP2Q14188 446 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 ATXN7L2Q5T6C5 722 aaPredicted RBP25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 MEI1Q5TIA1 1274 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 DCAF12L1Q5VU92 463 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 ZNF776Q68DI1 518 aaPredicted RBP25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 FAM160A2Q8N612 972 aaPredicted RBP25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 TRIM58Q8NG06 486 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 OR8D1Q8WZ84 308 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 HAUS1Q96CS2 278 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 PCDHGA2Q9Y5H1 932 aa25.81■■□□□ 1.72
TMEM55B-202ENST00000398020 RNASEH1O60930 286 aaKnown RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 IL1BP01584 269 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 ZFXP17010 805 aaPredicted RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 RECQLP46063 649 aaPredicted RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 PSMD8P48556 350 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 RHOAP61586 193 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 PPP2R5EQ16537 467 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 CARD16Q5EG05 197 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 RYBPQ8N488 228 aaPredicted RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 OSBPL8Q9BZF1 889 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 FBRSQ9HAH7 460 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 MCF2LO15068 1137 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 HRO43593 1189 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 PEX11BO96011 259 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 ACADMP11310 421 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 PECAM1P16284 738 aaPredicted RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 METAP1P53582 386 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 COPS2P61201 443 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 SLC10A7Q0GE19 358 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 POM121L1PQ3SYA9 428 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 B4GALNT4Q76KP1 1039 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 CCNYQ8ND76 341 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 GRIN3AQ8TCU5 1115 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 CASKIN2Q8WXE0 1202 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 ISG20Q96AZ6 181 aaKnown RBP25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 CCDC114Q96M63 670 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 LHX3Q9UBR4 397 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 SARDHQ9UL12 918 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 CYP8B1Q9UNU6 501 aa25.8■■□□□ 1.72
TMEM55B-202ENST00000398020 RNF103O00237 685 aa25.79■■□□□ 1.72
TMEM55B-202ENST00000398020 DNTTP04053 509 aa25.79■■□□□ 1.72
TMEM55B-202ENST00000398020 CTSLP07711 333 aa25.79■■□□□ 1.72
TMEM55B-202ENST00000398020 GKP32189 559 aa25.79■■□□□ 1.72
TMEM55B-202ENST00000398020 CCNHP51946 323 aaPredicted RBP25.79■■□□□ 1.72
TMEM55B-202ENST00000398020 CST6Q15828 149 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms