RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TMEM132CQ8N3T6 1108 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ETNK2Q9NVF9 386 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ZSCAN5CA6NGD5 496 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 CCT8L1PA6NM43 557 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SOX6P35712 828 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 CEP78Q5JTW2 689 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 NDUFAF1Q9Y375 327 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 UBIAD1Q9Y5Z9 338 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 STK40Q8N2I9 435 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SPATA6LQ8N4H0 392 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 VPS45Q9NRW7 570 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 IL5RAQ01344 420 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 FASTKQ14296 549 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 C9orf57Q5W0N0 161 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SCARA3Q6AZY7 606 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 R3HCC1LQ7Z5L2 792 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 DEFB107AQ8IZN7 70 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 TCF7L2Q9NQB0 619 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 LYVE1Q9Y5Y7 322 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 ASTN1O14525 1302 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 ANXA5P08758 320 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SLC35G4P0C7Q5 338 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 CDC25CP30307 473 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 GPAT3Q53EU6 434 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 NRSN1Q8IZ57 195 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SEMA4AQ9H3S1 761 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 TRMT13Q9NUP7 481 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 RPL21P46778 160 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 UBXN2BQ14CS0 331 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 C16orf72Q14CZ0 275 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 XKR6Q5GH73 641 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 AGMOQ6ZNB7 445 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 LRRC74BQ6ZQY2 392 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 ASTN2O75129 1339 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 NTRK1P04629 796 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 RPL9P32969 192 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 GNA13Q14344 377 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 TBCELQ5QJ74 424 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 HAS1Q92839 578 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 MDM4O15151 490 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 GP5P40197 560 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 MYBPC2Q14324 1141 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 OR14C36Q8NHC7 312 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 MKL1Q969V6 931 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 CACNB4O00305 520 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 USP2O75604 605 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 GLI1P08151 1106 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 PSEN1P49768 467 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 NDRG1Q92597 394 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 MCRS1Q96EZ8 462 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 SNRNP25Q9BV90 132 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 ASF1AQ9Y294 204 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 DPYSL3Q14195 570 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 DUSP28Q4G0W2 176 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 KRT77Q7Z794 578 aa11.49□□□□□ -0.57
TTC28-201ENST00000397906 ZSCAN18Q8TBC5 510 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 TRIT1Q9H3H1 467 aaKnown RBP11.49□□□□□ -0.57
TTC28-201ENST00000397906 A0A087X1B8 175 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 AOC2O75106 756 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 BANF1O75531 89 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 COPZ1P61923 177 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 ACSM2AQ08AH3 577 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 KCTD19Q17RG1 926 aaPredicted RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 ACSM2BQ68CK6 577 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 ZFP14Q9HCL3 533 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 CD84Q9UIB8 345 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 DUSP12Q9UNI6 340 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 DLK2Q6UY11 383 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 TMEM26Q6ZUK4 368 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 UNC93AQ86WB7 457 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 CHST7Q9NS84 486 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 LAG3P18627 525 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 PKN2Q16513 984 aaKnown RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 SCUBE1Q8IWY4 988 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 MRPL48Q96GC5 212 aaKnown RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
TTC28-201ENST00000397906 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 CATP04040 527 aaKnown RBP11.48□□□□□ -0.57
TTC28-201ENST00000397906 PTENP60484 403 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms