RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SCN10AQ9Y5Y9 1956 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 ATP6V1G1O75348 118 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 HARS2P49590 506 aaKnown RBP18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 GRM3Q14832 879 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TBCCQ15814 346 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 NAPEPLDQ6IQ20 393 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 RAPH1Q70E73 1250 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SLC25A41Q8N5S1 370 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 IRGQQ8WZA9 623 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 PANX3Q96QZ0 392 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 VCXQ9H320 206 aa18.65■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MAGEB16A2A368 324 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 NCF2P19878 526 aaPredicted RBP18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CPOXP36551 454 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SLC34A1Q06495 639 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MGAT3Q09327 533 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 PRPSAP1Q14558 356 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 POU6F1Q14863 301 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 RIPOR1Q6ZS17 1223 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 KDELC2Q7Z4H8 507 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CLEC14AQ86T13 490 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 RASAL3Q86YV0 1011 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 IPMKQ8NFU5 416 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 OR6Y1Q8NGX8 325 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 NMRAL1Q9HBL8 299 aa18.64■□□□□ 0.58
CHRFAM7A-202ENST00000397827 NVLO15381 856 aaKnown RBP18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PHGDHO43175 533 aaKnown RBP18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ATP5BP06576 529 aaKnown RBP18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 AVPR1AP37288 418 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ITGA7Q13683 1181 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 DNAL1Q4LDG9 190 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MRPL10Q7Z7H8 261 aaKnown RBP18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SOCS4Q8WXH5 440 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 TK2O00142 265 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 TIMM44O43615 452 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PAGE1O75459 146 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 HSPA4LO95757 839 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MPOP05164 745 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 VHLP40337 213 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PEX6Q13608 980 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PDPK2PQ6A1A2 396 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OVOS1Q6IE37 1185 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OR52E8Q6IFG1 317 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ARHGAP12Q8IWW6 846 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ATPAF2Q8N5M1 289 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CFAP61Q8NHU2 1237 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PKMYT1Q99640 499 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 COG4Q9H9E3 785 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PREBQ9HCU5 417 aa18.64■□□□□ 0.57
CHRFAM7A-202ENST00000397827 LOC100653049A0A140TA62 436 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 IRAK2O43187 625 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 KRT34O76011 436 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MOCS2O96007 188 aaPredicted RBP18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OR4Q2P0C623 313 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 GLRBP48167 497 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CDK7P50613 346 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 RALGPS1Q5JS13 557 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 FOXB2Q5VYV0 432 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 LRRC74BQ6ZQY2 392 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 UCMAQ8WVF2 138 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CASP10Q92851 521 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 NDNQ99608 321 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ADAM2Q99965 735 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MCMBPQ9BTE3 642 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PPP1R12CQ9BZL4 782 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ATXN3LQ9H3M9 355 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 STN1Q9H668 368 aaKnown RBP18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 DNAJC28Q9NX36 388 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 GALNT8Q9NY28 637 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 STX18Q9P2W9 335 aaKnown RBP18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ZNF189O75820 626 aaPredicted RBP18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SLC5A3P53794 718 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 C1orf146Q5VVC0 180 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 DENND6AQ8IWF6 608 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PHTF2Q8N3S3 785 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MAPK15Q8TD08 544 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SCG3Q8WXD2 468 aaKnown RBP18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 RSPH1Q8WYR4 309 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ZNF333Q96JL9 665 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OSBPL2Q9H1P3 480 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 TASP1Q9H6P5 420 aa18.63■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PDLIM1O00151 329 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 KLHL2O95198 593 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 GABRB3P28472 473 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CCR10P46092 362 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ZNF135P52742 658 aaPredicted RBP18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CTBP1Q13363 440 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 FRG1Q14331 258 aaKnown RBP18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 TSNAXIP1Q2TAA8 658 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SLC9B1Q4ZJI4 515 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 BTBD8Q5XKL5 378 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ZC3HC1Q86WB0 502 aaKnown RBP18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PPP1R36Q96LQ0 422 aa18.62■□□□□ 0.57
CHRFAM7A-202ENST00000397827 KIFC1Q9BW19 673 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms