RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 C12orf40Q86WS4 652 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 EIF1ADQ8N9N8 165 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 UCMAQ8WVF2 138 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 PSKH2Q96QS6 385 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 PNKPQ96T60 521 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 POLR1EQ9GZS1 481 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 EPB41L5Q9HCM4 733 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 V9GYY5 206 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 ZSCAN5DPP0CG00 497 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 ETS1P14921 441 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 CES1P23141 567 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 NNMTP40261 264 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 SERPINH1P50454 418 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 ECT2LQ008S8 904 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 TDGQ13569 410 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 ADIPOR2Q86V24 386 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 TERB1Q8NA31 727 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 GLIS1Q8NBF1 620 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 USP33Q8TEY7 942 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 AGAP3Q96P47 875 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 TRIM31Q9BZY9 425 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 ANKZF1Q9H8Y5 726 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 GDF3Q9NR23 364 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 SLC8A2Q9UPR5 921 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 HS3ST2Q9Y278 367 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 ATP8A1Q9Y2Q0 1164 aa23.98■■□□□ 1.43
TSPAN4-202ENST00000397396 COL4A3Q01955 1670 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 SHROOM3Q8TF72 1996 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 MYOFQ9NZM1 2061 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 BHMG1C9JSJ3 638 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 DNALI1O14645 258 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 APODP05090 189 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 SRPRAP08240 638 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 GLDCP23378 1020 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 TNFRSF8P28908 595 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 OPRD1P41143 372 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 GRIA2P42262 883 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 BASP1P80723 227 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 SLC10A7Q0GE19 358 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 RALGPS1Q5JS13 557 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 WDR93Q6P2C0 686 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 RALGPS2Q86X27 583 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.97■■□□□ 1.436e-6■■□□□ 13.5
TSPAN4-202ENST00000397396 CEP44Q9C0F1 390 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 DPH5Q9H2P9 285 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 GLOD4Q9HC38 313 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 SLC2A4RGQ9NR83 387 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 RAB6BQ9NRW1 208 aa23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 TPX2Q9ULW0 747 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-202ENST00000397396 ERI2A8K979 691 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 ZBTB24O43167 697 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 PSMD3O43242 534 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 ANXA9O76027 345 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 TMCC1O94876 653 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 SEC31AO94979 1220 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 HLA-DQB2P05538 268 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 DLDP09622 509 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 SRFP11831 508 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 SEMA5AQ13591 1074 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 GEN1Q17RS7 908 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 IZUMO3Q5VZ72 239 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 HOOK3Q86VS8 718 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 PPIL6Q8IXY8 311 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 KDM1BQ8NB78 822 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 TTC8Q8TAM2 541 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 FCRL5Q96RD9 977 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 MGME1Q9BQP7 344 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 CEP41Q9BYV8 373 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 CIPCQ9C0C6 399 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 NT5MQ9NPB1 228 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 EIF2B3Q9NR50 452 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 AAR2Q9Y312 384 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 SNX24Q9Y343 169 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 TTLL3Q9Y4R7 772 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 KIAA1549LQ6ZVL6 1849 aa23.96■■□□□ 1.43
TSPAN4-202ENST00000397396 E7EVH7 732 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 NFKB1P19838 968 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 MAPK8P45983 427 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 RPL21P46778 160 aaKnown RBP23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 SLC6A11P48066 632 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 NRLP54845 237 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 RHOAP61586 193 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ST8SIA6P61647 398 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 CDK16Q00536 496 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 KDSRQ06136 332 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 MORF4L2Q15014 288 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ELF2Q15723 593 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 SLC14A2Q15849 920 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ALG1LQ6GMV1 187 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 PRUNE1Q86TP1 453 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 CNTD1Q8N815 330 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ATP11CQ8NB49 1132 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ISG20Q96AZ6 181 aaKnown RBP23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 SLC25A51Q9H1U9 297 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 PRDM6Q9NQX0 595 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 ELOVL2Q9NXB9 296 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 SHOC2Q9UQ13 582 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 REV3LO60673 3130 aa23.95■■□□□ 1.42
TSPAN4-202ENST00000397396 TBC1D3BA6NDS4 549 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms