RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 IL10RBQ08334 325 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 LLGL1Q15334 1064 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 PPP2R5EQ16537 467 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 INO80DQ53TQ3 878 aaPredicted RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 KIAA1324Q6UXG2 1013 aaKnown RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 LRRC49Q8IUZ0 686 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 STK40Q8N2I9 435 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 PCDH20Q8N6Y1 951 aaKnown RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 PLD5Q8N7P1 536 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 TRIM58Q8NG06 486 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 ISG20Q96AZ6 181 aaKnown RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 HES6Q96HZ4 224 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 CCDC114Q96M63 670 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 TPSD1Q9BZJ3 242 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 TNKS2Q9H2K2 1166 aa19.56■□□□□ 0.72
HOXA9-202ENST00000396345 TRMT1Q9NXH9 659 aaKnown RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 FARP1Q9Y4F1 1045 aaPredicted RBP19.56■□□□□ 0.72
HOXA9-202ENST00000396345 hCG_1818297A0A087WSY0 165 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 RNASEH1O60930 286 aaKnown RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 ZNF821O75541 412 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 TMCC1O94876 653 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 MAP3K6O95382 1288 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 CETN2P41208 172 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 DNA2P51530 1060 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 GALNT2Q10471 571 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 SLC10A2Q12908 348 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 ELAVL3Q14576 367 aaKnown RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 ZNF776Q68DI1 518 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 OR8D1Q8WZ84 308 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 PRCCQ92733 491 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 ATOH1Q92858 354 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 SIPA1Q96FS4 1042 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 FAM129BQ96TA1 746 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 RSPH9Q9H1X1 276 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-202ENST00000396345 DTLQ9NZJ0 730 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 PYCARDQ9ULZ3 195 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 PCDHGA2Q9Y5H1 932 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 HEY1Q9Y5J3 304 aa19.55■□□□□ 0.72
HOXA9-202ENST00000396345 MAFKO60675 156 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 CST8O60676 142 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 PYGMP11217 842 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 MX2P20592 715 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 GARSP41250 739 aaKnown RBP19.54■□□□□ 0.72
HOXA9-202ENST00000396345 RECQLP46063 649 aaPredicted RBP19.54■□□□□ 0.72
HOXA9-202ENST00000396345 RPS14P62263 151 aaKnown RBP19.54■□□□□ 0.72
HOXA9-202ENST00000396345 CYTH1Q15438 398 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 CARD16Q5EG05 197 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 MEI1Q5TIA1 1274 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 CACUL1Q86Y37 369 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 ZBTB44Q8NCP5 570 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 OR2A12Q8NGT7 310 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 ZNF599Q96NL3 588 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 HEMGNQ9BXL5 484 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.54■□□□□ 0.72
HOXA9-202ENST00000396345 WDFY4Q6ZS81 3184 aa19.54■□□□□ 0.72
HOXA9-202ENST00000396345 MCF2LO15068 1137 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 ALOX15BO15296 676 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 GSRP00390 522 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 ACADMP11310 421 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 TGM2P21980 687 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 PTPN7P35236 360 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 RHOAP61586 193 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 RFTN1Q14699 578 aaPredicted RBP19.53■□□□□ 0.72
HOXA9-202ENST00000396345 RPS6KA1Q15418 735 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 USP39Q53GS9 565 aaKnown RBP19.53■□□□□ 0.72
HOXA9-202ENST00000396345 ZC3H14Q6PJT7 736 aaKnown RBP19.53■□□□□ 0.72
HOXA9-202ENST00000396345 NPNTQ6UXI9 565 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 DSG4Q86SJ6 1040 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 MMAAQ8IVH4 418 aaKnown RBP19.53■□□□□ 0.72
HOXA9-202ENST00000396345 NSMCE1Q8WV22 266 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 OSBPL8Q9BZF1 889 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 TM6SF2Q9BZW4 377 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 EFR3BQ9Y2G0 817 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 SHROOM3Q8TF72 1996 aa19.53■□□□□ 0.72
HOXA9-202ENST00000396345 EML5Q05BV3 1969 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 DNTTP04053 509 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 C7P10643 843 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 CNR2P34972 360 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 PSMD8P48556 350 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 NR2C2P49116 596 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 SNRPD1P62314 119 aaKnown RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 ZBTB16Q05516 673 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 ADCY2Q08462 1091 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 ZNF211Q13398 564 aaPredicted RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 BYSLQ13895 437 aaKnown RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 CST6Q15828 149 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 TMCO4Q5TGY1 634 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 AADACL2Q6P093 401 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 DPY19L3Q6ZPD9 716 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 BZW1Q7L1Q6 419 aaKnown RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 PLPP6Q8IY26 295 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 RYBPQ8N488 228 aaPredicted RBP19.52■□□□□ 0.72
HOXA9-202ENST00000396345 CHST14Q8NCH0 376 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 CCNYQ8ND76 341 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 TSGA13Q96PP4 275 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 R4GN57 208 aa19.52■□□□□ 0.72
HOXA9-202ENST00000396345 GOLGA6L9A6NEM1 432 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 ZNF217O75362 1048 aa19.51■□□□□ 0.71
HOXA9-202ENST00000396345 IGSF6O95976 241 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms