RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FBXO22Q8NEZ5 403 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 BRSK1Q8TDC3 778 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC22A17Q8WUG5 538 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CFHR5Q9BXR6 569 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 KIAA1522Q9P206 1035 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC7A4O43246 635 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ATP2C2O75185 946 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RB1P06400 928 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ESRRGP62508 458 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UPP1Q16831 310 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD20A4Q4UJ75 823 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RNASEH2BQ5TBB1 312 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TXNDC11Q6PKC3 985 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TEKT5Q96M29 485 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ACP6Q9NPH0 428 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ATP11BQ9Y2G3 1177 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ACAT1P24752 427 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SUOXP51687 545 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PHEXP78562 749 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PPM1LQ5SGD2 360 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ARMC12Q5T9G4 340 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ADGRD1Q6QNK2 874 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 INPP5DQ92835 1189 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TSGA13Q96PP4 275 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LRRC4CQ9HCJ2 640 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FZD1Q9UP38 647 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PCDHB1Q9Y5F3 818 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 A0A087X1B8 175 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UBA6A0AVT1 1052 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 M0QZQ0 153 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GABRDO14764 452 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MAGEC1O60732 1142 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CYP2A6P11509 494 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CCND1P24385 295 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SSTR1P30872 391 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TRABD2AQ86V40 505 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF473Q8WTR7 871 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ENOPH1Q9UHY7 261 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CRLS1Q9UJA2 301 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 POLEQ07864 2286 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SHOX2O60902 331 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 THRAP10827 490 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MAPK1P28482 360 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SCNN1BP51168 640 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SEMA5AQ13591 1074 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 POU6F1Q14863 301 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PRAMEF19Q5SWL8 479 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RBFAQ8N0V3 343 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MCOLN3Q8TDD5 553 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 HDAC7Q8WUI4 952 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 EDEM1Q92611 657 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF516Q92618 1163 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GBA3Q9H227 469 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MUC6Q6W4X9 2439 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ILVBLA1L0T0 632 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 E7ENQ6 273 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SH3BP5O60239 455 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 VNN1O95497 513 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ASLP04424 464 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LPOP22079 712 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 DGKZQ13574 1117 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LPCAT2Q7L5N7 544 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 BLOC1S5Q8TDH9 187 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MYLPFQ96A32 169 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 OTUB1Q96FW1 271 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FCRL5Q96RD9 977 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PCDHB18PQ96TA0 734 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ASPSCR1Q9BZE9 553 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ADAMTS10Q9H324 1103 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MYO16Q9Y6X6 1858 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ABCA4P78363 2273 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 A0A096LPK6 155 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TBC1D4O60343 1298 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF865P0CJ78 1059 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MBL2P11226 248 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CXCR3P49682 368 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC14A2Q15849 920 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MPPE1Q53F39 396 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FBXO46Q6PJ61 603 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF333Q96JL9 665 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 EGFL8Q99944 293 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC4A7Q9Y6M7 1214 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MGAMO43451 1857 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 HSPA1AP0DMV8 641 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 HSPA1BP0DMV9 641 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 DUSP4Q13115 394 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 INO80DQ53TQ3 878 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RASSF3Q86WH2 238 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MYLK4Q86YV6 388 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TMPRSS6Q8IU80 811 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 STYXQ8WUJ0 223 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM159Q96B96 161 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CHORDC1Q9UHD1 332 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 C2CD2LO14523 706 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 KRT6AP02538 564 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SOD2P04179 222 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 KRT6BP04259 564 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms