RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SLC10A7Q0GE19 358 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 CCDC15Q0P6D6 951 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 MS4A13Q5J8X5 152 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 PSMG2Q969U7 264 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 SLC7A6OSQ96CW6 309 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 MYEOVQ96EZ4 313 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 RBBP8Q99708 897 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 SHCBP1LQ9BZQ2 653 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 MARCH2Q9P0N8 246 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 DNAJC16Q9Y2G8 782 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 CDY1Q9Y6F8 540 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 TET1Q8NFU7 2136 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 ADAM12O43184 909 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 SNUPNO95149 360 aaKnown RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 GSRP00390 522 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 CNTFP26441 200 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 MPP1Q00013 466 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 GRM3Q14832 879 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 HSF5Q4G112 596 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 GRTP1Q5TC63 336 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 ZNF280DQ6N043 979 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 ATG14Q6ZNE5 492 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 TRIM74Q86UV6 250 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 TRIM73Q86UV7 250 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 RTL3Q8N8U3 475 aaKnown RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 NACA2Q9H009 215 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 FBXO44Q9H4M3 255 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 SCML2Q9UQR0 700 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 FCHO1O14526 889 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 BUD23O43709 281 aaKnown RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 GLRA3O75311 464 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 RPS6KA3P51812 740 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 VWA5B1Q5TIE3 1220 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 FBXL22Q6P050 247 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 FUT10Q6P4F1 479 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 RFWD3Q6PCD5 774 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 CYS1Q717R9 158 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 PNPOQ9NVS9 261 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 DCDC2Q9UHG0 476 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 AAR2Q9Y312 384 aaKnown RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 ACTL7AQ9Y615 435 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 C2P06681 752 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 NPY2RP49146 381 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 KCNQ1P51787 676 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 OCRLQ01968 901 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 KDSRQ06136 332 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 CBLBQ13191 982 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 TIFABQ6ZNK6 161 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 ZNF296Q8WUU4 475 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 VPS39Q96JC1 886 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 CASD1Q96PB1 797 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 TRIM17Q9Y577 477 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 TSC2P49815 1807 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 ENO1P06733 434 aaKnown RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 CD86P42081 329 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 SLC1A6P48664 564 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 USP10Q14694 798 aaKnown RBP18.17■□□□□ 0.5
SREBF1-204ENST00000395756 AGAP11Q8TF27 550 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 DEFB118Q96PH6 123 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 TLR6Q9Y2C9 796 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 SQORQ9Y6N5 450 aa18.17■□□□□ 0.5
SREBF1-204ENST00000395756 ERI2A8K979 691 aaKnown RBP18.16■□□□□ 0.5
SREBF1-204ENST00000395756 FGF10O15520 208 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-204ENST00000395756 CAPN15O75808 1086 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 PYGLP06737 847 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 CYP2C18P33260 490 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 PCLAFQ15004 111 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 EML3Q32P44 896 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 DPF3Q92784 378 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 SP110Q9HB58 689 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 SOX13Q9UN79 622 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 MTMR11A4FU01 709 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 H0Y3Z8 333 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 CSPG5O95196 566 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 AHSGP02765 367 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 LIMK2P53671 638 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 DSC2Q02487 901 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 CTC1Q2NKJ3 1217 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 KYAT3Q6YP21 454 aaKnown RBP18.16■□□□□ 0.5
SREBF1-204ENST00000395756 SLC41A1Q8IVJ1 513 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 TRIM42Q8IWZ5 723 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 BCL7CQ8WUZ0 217 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-204ENST00000395756 SCYL1Q96KG9 808 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 UNC93B1Q9H1C4 597 aa18.16■□□□□ 0.5
SREBF1-204ENST00000395756 PRKCGP05129 697 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 ESRRAP11474 423 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-204ENST00000395756 FGF3P11487 239 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-204ENST00000395756 CPA3P15088 417 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 ARRB2P32121 409 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 WNT3AP56704 352 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 THEMIS2Q5TEJ8 643 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 MBLAC2Q68D91 279 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 LDB1Q86U70 411 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-204ENST00000395756 SGF29Q96ES7 293 aa18.15■□□□□ 0.5
SREBF1-204ENST00000395756 ZYG11BQ9C0D3 744 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms