RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GRM3Q14832 879 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 SEL1L3Q68CR1 1132 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 ZYG11AQ6WRX3 759 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 CATSPER4Q7RTX7 472 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 OSTM1Q86WC4 334 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 WNT8BQ93098 351 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 CDRT15Q96T59 188 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 SERPINI1Q99574 410 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 C1QTNF1Q9BXJ1 281 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 ADAMTS10Q9H324 1103 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 ZNF385DQ9H6B1 395 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 CHRAC1Q9NRG0 131 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 GDAP2Q9NXN4 497 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 SLC39A10Q9ULF5 831 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 OR6B1O95007 311 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 PIGNO95427 931 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 GRIA4P48058 902 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 RPS6KA3P51812 740 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 MRPS22P82650 360 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 PIGGQ5H8A4 983 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 LIPMQ5VYY2 423 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 BNC2Q6ZN30 1099 aaPredicted RBP18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 APPL2Q8NEU8 664 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 RP9Q8TA86 221 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 ADAM32Q8TC27 787 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 RCN3Q96D15 328 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 SLC2A13Q96QE2 648 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 DUSP16Q9BY84 665 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 GBA3Q9H227 469 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 TASP1Q9H6P5 420 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 CDHR5Q9HBB8 845 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 STAP1Q9ULZ2 295 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 GOLGA8TH3BQL2 631 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 I6L893 689 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 DNAJA2O60884 412 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 PGM3O95394 542 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 CYBAP13498 195 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 TPH1P17752 444 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 MSX2P35548 267 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 PPIDQ08752 370 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ZBTB17Q13105 803 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ADGRE1Q14246 886 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ARL13AQ5H913 290 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 CPSF7Q8N684 471 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 NPWQ8N729 165 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 HNRNPABQ99729 332 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 NUF2Q9BZD4 464 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 GOLGA2P5Q9HBQ8 144 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 UBAP1Q9NZ09 502 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 KLK14Q9P0G3 267 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ZDHHC2Q9UIJ5 367 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 MID2Q9UJV3 735 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 VPS28Q9UK41 221 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 FNDC1Q4ZHG4 1894 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 CASP8AP2Q9UKL3 1982 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 SMIM31A0A1B0GVY4 71 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ELNP15502 786 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 NMBRP28336 390 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 PMLP29590 882 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ADRA1BP35368 520 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 SEMA3BQ13214 749 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 IRF5Q13568 498 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 CYLC2Q14093 348 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 FLOT2Q14254 428 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ANO4Q32M45 955 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 RDH11Q8TC12 318 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 ZNF560Q96MR9 790 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 CATSPER2Q96P56 530 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 GPR22Q99680 433 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 EPB41L1Q9H4G0 881 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 RIMS3Q9UJD0 308 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 PCDHGB4Q9UN71 923 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 PCDHGB5Q9Y5G0 923 aa18.64■□□□□ 0.57
PCDHA1-202ENST00000394633 TRIP12Q14669 1992 aaPredicted RBP18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 MYLKQ15746 1914 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 SMIM28A0A1B0GU29 152 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 PHGDHO43175 533 aaKnown RBP18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 F2P00734 622 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 FYNP06241 537 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 APOA4P06727 396 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 NFKB1P19838 968 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 PPARGP37231 505 aaPredicted RBP18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 DPP6P42658 865 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 NPY2RP49146 381 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 PKNOX1P55347 436 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 NSUN2Q08J23 767 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 CEACAM7Q14002 265 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 TMEM198Q66K66 360 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 NOTUMQ6P988 496 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 PAQR9Q6ZVX9 377 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 TNIP3Q96KP6 325 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 NDNQ99608 321 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 IL22Q9GZX6 179 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 FAM49AQ9H0Q0 323 aaPredicted RBP18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 ANKRD6Q9Y2G4 727 aa18.63■□□□□ 0.57
PCDHA1-202ENST00000394633 ERI2A8K979 691 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms