RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 PDZD8Q8NEN9 1154 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 CDK5RAP1Q96SZ6 601 aaKnown RBP23.6■■□□□ 1.37
RARA-204ENST00000394089 CLUHO75153 1309 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 E9PAM4 449 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 F8W8V4 182 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 TBX18O95935 607 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 IGLV3-27P01718 113 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 URODP06132 367 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 GPX6P59796 221 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 COG7P83436 770 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 TMED2Q15363 201 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 FYB2Q5VWT5 728 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 OTOP2Q7RTS6 562 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 UBE2Q1Q7Z7E8 422 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 ATP6V0D2Q8N8Y2 350 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 FBXO36Q8NEA4 188 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 VPS37BQ9H9H4 285 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 IGSF9Q9P2J2 1179 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 GMEB1Q9Y692 573 aa23.6■■□□□ 1.37
RARA-204ENST00000394089 WASH4PA8MWX3 477 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 TYROBPO43914 113 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 PHBP35232 272 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 RAP1GDS1P52306 607 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 CDK16Q00536 496 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 ACBD5Q5T8D3 534 aaPredicted RBP23.59■■□□□ 1.37
RARA-204ENST00000394089 PIK3R6Q5UE93 754 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 C16orf59Q7L2K0 433 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 CAND1Q86VP6 1230 aaKnown RBP23.59■■□□□ 1.37
RARA-204ENST00000394089 ZNF567Q8N184 647 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 TRABDQ9H4I3 376 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 EIF2B3Q9NR50 452 aaKnown RBP23.59■■□□□ 1.37
RARA-204ENST00000394089 SEPT10Q9P0V9 454 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 STK39Q9UEW8 545 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 MAGED2Q9UNF1 606 aaPredicted RBP23.59■■□□□ 1.37
RARA-204ENST00000394089 TEX264Q9Y6I9 313 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 PTPN3P26045 913 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 KPNA1P52294 538 aaPredicted RBP23.59■■□□□ 1.37
RARA-204ENST00000394089 RING1Q06587 406 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 MTA1Q13330 715 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 PPIGQ13427 754 aaKnown RBP eCLIP23.59■■□□□ 1.374e-7■□□□□ 11.3
RARA-204ENST00000394089 SYCP2LQ5T4T6 812 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 C14orf80Q86SX3 495 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 BTN2A3PQ96KV6 586 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 FNIP2Q9P278 1114 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 ANGPTL2Q9UKU9 493 aa23.59■■□□□ 1.37
RARA-204ENST00000394089 TLR5O60602 858 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 CSH1P0DML2 217 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 CSH2P0DML3 217 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 HSPA1AP0DMV8 641 aaKnown RBP23.58■■□□□ 1.37
RARA-204ENST00000394089 HSPA1BP0DMV9 641 aaKnown RBP23.58■■□□□ 1.37
RARA-204ENST00000394089 SESN3P58005 492 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 LIN52Q52LA3 116 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 PALM2Q8IXS6 379 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 KBTBD2Q8IY47 623 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 ZNF683Q8IZ20 524 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.58■■□□□ 1.37
RARA-204ENST00000394089 LZICQ8WZA0 190 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 NSL1Q96IY1 281 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 VAT1Q99536 393 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 CENPKQ9BS16 269 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 CYP4F11Q9HBI6 524 aa23.58■■□□□ 1.37
RARA-204ENST00000394089 SLC12A8A0AV02 714 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 ZSCAN9O15535 394 aaPredicted RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 TROVE2P10155 538 aaKnown RBP eCLIP23.57■■□□□ 1.36
RARA-204ENST00000394089 ELK3P41970 407 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 MAGEA3P43357 314 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 HTRA4P83105 476 aaPredicted RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 MTDHQ86UE4 582 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 MIB1Q86YT6 1006 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 ARHGAP12Q8IWW6 846 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 RTL3Q8N8U3 475 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 ZNF75CPQ92670 426 aaPredicted RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 DPF3Q92784 378 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 LRRC39Q96DD0 335 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 MYRFLQ96LU7 910 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 TSGA13Q96PP4 275 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 CCSER2Q9H7U1 834 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 XAB2Q9HCS7 855 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 PPARGC1AQ9UBK2 798 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 FETUBQ9UGM5 382 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 TRHDEQ9UKU6 1024 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 MAFFQ9ULX9 164 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 PCDHB12Q9Y5F1 795 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 EXOC1LA0A1B0GW35 172 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 KCNK1O00180 336 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 HAUS5O94927 633 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 FGBP02675 491 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 HMGA1P17096 107 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 MS4A13Q5J8X5 152 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 AFMIDQ63HM1 303 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 ZNF534Q76KX8 674 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 STMN2Q93045 179 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 CELF6Q96J87 481 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 SMC6Q96SB8 1091 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.57■■□□□ 1.36
RARA-204ENST00000394089 HBS1LQ9Y450 684 aaKnown RBP23.57■■□□□ 1.36
RARA-204ENST00000394089 YIPF1Q9Y548 306 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 NUMBLQ9Y6R0 609 aa23.57■■□□□ 1.36
RARA-204ENST00000394089 PTPRSQ13332 1948 aa23.56■■□□□ 1.36
RARA-204ENST00000394089 GJB5O95377 273 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms