RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 DAPK3O43293 454 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 BUB1O43683 1085 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 KDELR3O43731 214 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ADH1BP00325 375 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 IGHV4-34P06331 123 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 H2AFZP0C0S5 128 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 TMEM253P0C7T8 217 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ERCC2P18074 760 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 AMPD1P23109 780 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CHRNA3P32297 505 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCK1P35558 622 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ID4P47928 161 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CCNHP51946 323 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ADPRHP54922 357 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PPP2CBP62714 309 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PPP2CAP67775 309 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZBTB16Q05516 673 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CNTN1Q12860 1018 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 DPYSQ14117 519 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PIGHQ14442 188 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ATP13A4Q4VNC1 1196 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 SPDYCQ5MJ68 293 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PEAR1Q5VY43 1037 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 RETSATQ6NUM9 610 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 NCEH1Q6PIU2 408 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 H2AFVQ71UI9 128 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARHGAP12Q8IWW6 846 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 RYBPQ8N488 228 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 NIPA2Q8N8Q9 360 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR14C36Q8NHC7 312 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 BIRC7Q96CA5 298 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 MRFAP1L1Q96HT8 127 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 GTPBP2Q9BX10 602 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC39A8Q9C0K1 460 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAGEH1Q9H213 219 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZDHHC6Q9H6R6 413 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 LRRC19Q9H756 370 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CATSPERBQ9H7T0 1116 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CWC15Q9P013 229 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 IP6K2Q9UHH9 426 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 EIF2B4Q9UI10 523 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 PPM1HQ9ULR3 514 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 NCKAP1Q9Y2A7 1128 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 HYOU1Q9Y4L1 999 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 SOWAHDA6NJG2 315 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 C4orf47A7E2U8 309 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 WASH4PA8MWX3 477 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 H3BRJ5 948 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 MYO1FO00160 1098 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 DFFAO00273 331 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 WNT9AO14904 365 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 LEFTY1O75610 366 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 GJB3O75712 270 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 TMCC1O94876 653 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 PROSCO94903 275 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 ENGP17813 658 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 C5AR1P21730 350 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 ETFBP38117 255 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 PAPOLAP51003 745 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SERINC3Q13530 473 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 KRT81Q14533 505 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 MESDQ14696 234 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 PARP15Q460N3 678 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 CARD16Q5EG05 197 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 LRRC73Q5JTD7 316 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 WDR45BQ5MNZ6 344 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SYCP2LQ5T4T6 812 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 PIP5KL1Q5T9C9 394 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 STPG1Q5TH74 334 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 AGBL4Q5VU57 503 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 KIAA0895LQ68EN5 471 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 USP30Q70CQ3 517 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 POLNQ7Z5Q5 900 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 UMODL1-AS1Q8N2C9 162 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SPC24Q8NBT2 197 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 CADM4Q8NFZ8 388 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC35G2Q8TBE7 412 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 LRRN4Q8WUT4 740 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 FOXJ1Q92949 421 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 VOPP1Q96AW1 172 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC6A18Q96N87 628 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 CSPG4P5Q96PW8 444 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 GOLPH3Q9H4A6 298 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 EBF2Q9HAK2 575 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 SGK2Q9HBY8 427 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 UVRAGQ9P2Y5 699 aa7.81□□□□□ -1.16
HMGB3P1-201ENST00000393368 IL36AQ9UHA7 158 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms