RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 IPMKQ8NFU5 416 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 C2orf15Q8WU43 125 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 VPS39Q96JC1 886 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 BTBD10Q9BSF8 475 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 GPR62Q9BZJ7 368 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 SLC25A51Q9H1U9 297 aa14.53□□□□□ -0.08
MKS1-203ENST00000393120 TLR8Q9NR97 1041 aaKnown RBP14.53□□□□□ -0.08
MKS1-203ENST00000393120 DRGXA6NNA5 263 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 CAPN14A8MX76 684 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 IGLV3-27P01718 113 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 C2P06681 752 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 APOA4P06727 396 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 KCNA4P22459 653 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 ARCN1P48444 511 aaKnown RBP14.52□□□□□ -0.09
MKS1-203ENST00000393120 IRX4P78413 519 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 TBCCQ15814 346 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 DEFB115Q30KQ5 88 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 ZCCHC23Q6ZST2 131 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 LONP2Q86WA8 852 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 CEP57Q86XR8 500 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 C10orf107Q8IVU9 208 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 CRIPAKQ8N1N5 446 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.09
MKS1-203ENST00000393120 FBXO32Q969P5 355 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 AZIN2Q96A70 460 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 MRGPRX2Q96LB1 330 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 ZNF778Q96MU6 729 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 TMEM175Q9BSA9 504 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 FICDQ9BVA6 458 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 PRKD2Q9BZL6 878 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 NMUR2Q9GZQ4 415 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 VPS45Q9NRW7 570 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 MARCH5Q9NX47 278 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 TCAF1Q9Y4C2 921 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 NUP205Q92621 2012 aa14.52□□□□□ -0.09
MKS1-203ENST00000393120 C2orf71A6NGG8 1288 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 H7C4K7 107 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 KIF3CO14782 793 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 HOXA2O43364 376 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ITM2AO43736 263 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 H2AFYO75367 372 aaKnown RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 SERPINA6P08185 405 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 RALBP11234 206 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ALOX15P16050 662 aaPredicted RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 RING1Q06587 406 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 PREPLQ4J6C6 727 aaPredicted RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 WASHC2DQ5SRD0 308 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 KDELC1Q6UW63 502 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 TEX26Q8N6G2 289 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 FAM13CQ8NE31 585 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 DBF4BQ8NFT6 615 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 SH3TC2Q8TF17 1288 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 SEPT8Q92599 483 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 IMP4Q96G21 291 aaKnown RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 CEP295NLQ96MC4 621 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ATP13A1Q9HD20 1204 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 TREX1Q9NSU2 369 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 MID2Q9UJV3 735 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 MTMR11A4FU01 709 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 A8MUI8 341 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 G3V2L1 256 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 TRPA1O75762 1119 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ZDHHC11BP0C7U3 371 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 HAPLN1P10915 354 aaPredicted RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 COL6A2P12110 1019 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 SLC11A1P49279 550 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 KPNA1P52294 538 aaPredicted RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 ABCE1P61221 599 aaKnown RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 EFEMP1Q12805 493 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ALYREFQ86V81 257 aaKnown RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 FAM126BQ8IXS8 530 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 PLD6Q8N2A8 252 aaKnown RBP14.51□□□□□ -0.09
MKS1-203ENST00000393120 TTC9BQ8N6N2 239 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 RDH11Q8TC12 318 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 PPP4R1Q8TF05 950 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 AGAP11Q8TF27 550 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 SORT1Q99523 831 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 FSD1LQ9BXM9 530 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 MARCH2Q9P0N8 246 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 ZNF212Q9UDV6 495 aa14.51□□□□□ -0.09
MKS1-203ENST00000393120 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 NEBLO76041 1014 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 VNN2O95498 520 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 AHSGP02765 367 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 ESRRAP11474 423 aaPredicted RBP14.5□□□□□ -0.09
MKS1-203ENST00000393120 PAMP19021 973 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 ARNTP27540 789 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 TAF10Q12962 218 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 GRM3Q14832 879 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 POU6F1Q14863 301 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 SMAD1Q15797 465 aaKnown RBP14.5□□□□□ -0.09
MKS1-203ENST00000393120 KIAA0930Q6ICG6 404 aaPredicted RBP14.5□□□□□ -0.09
MKS1-203ENST00000393120 FBXL22Q6P050 247 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 FUT10Q6P4F1 479 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 TTC7BQ86TV6 843 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 SREK1Q8WXA9 508 aaKnown RBP14.5□□□□□ -0.09
MKS1-203ENST00000393120 PRR11Q96HE9 360 aaPredicted RBP14.5□□□□□ -0.09
MKS1-203ENST00000393120 RANBP9Q96S59 729 aa14.5□□□□□ -0.09
MKS1-203ENST00000393120 MIPEPQ99797 713 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms