RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FASTKD1Q53R41 847 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 SLC25A24Q6NUK1 477 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CCDC80Q76M96 950 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ERN2Q76MJ5 926 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 DET1Q7L5Y6 550 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ZC3H18Q86VM9 953 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 DENND6AQ8IWF6 608 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CYP2W1Q8TAV3 490 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ALG3Q92685 438 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 EFHD2Q96C19 240 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 EPSTI1Q96J88 318 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 FAR2Q96K12 515 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ADAM7Q9H2U9 754 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 BEX4Q9NWD9 120 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 ZC3H7BQ9UGR2 993 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 MAD2L2Q9UI95 211 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 CLCA1A8K7I4 914 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NFIBO00712 420 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 DHX15O43143 795 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 TGFAP01135 160 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CFIP05156 583 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 URODP06132 367 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 SRPRAP08240 638 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 IRF1P10914 325 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NTF4P34130 210 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 PNLIPRP1P54315 467 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 NKX3-2P78367 333 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ELP6Q0PNE2 266 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 RIN1Q13671 783 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CYP27C1Q4G0S4 372 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 FAM160B1Q5W0V3 765 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 TMEM132EQ6IEE7 984 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 RGS7BPQ6MZT1 257 aaPredicted RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 CDPF1Q6NVV7 123 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 LINC00116Q8NCU8 138 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 OR5AN1Q8NGI8 311 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 DLG3Q92796 817 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 COG3Q96JB2 828 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 MAP6Q96JE9 813 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 KLHL5Q96PQ7 755 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 MED15Q96RN5 788 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 JMJD8Q96S16 334 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ATP6V0BQ99437 205 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 IFT27Q9BW83 186 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 REXO4Q9GZR2 422 aaKnown RBP3.64□□□□□ -1.83
XRN1-202ENST00000392981 NACA2Q9H009 215 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 PCED1AQ9H1Q7 454 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 MUC13Q9H3R2 512 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 SEMA6CQ9H3T2 930 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 ATP13A2Q9NQ11 1180 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GTSE1Q9NYZ3 720 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 DLGAP2Q9P1A6 1054 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CCPG1Q9ULG6 757 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 CHMP2BQ9UQN3 213 aa3.64□□□□□ -1.83
XRN1-202ENST00000392981 GRM8O00222 908 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PCDH17O14917 1159 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SLC16A5O15375 505 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TAF5LO75529 589 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CYBBP04839 570 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LTA4HP09960 611 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 VPREB1P12018 145 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PCSK1P29120 753 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 IDUAP35475 653 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CD151P48509 253 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GATMP50440 423 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GIT2Q14161 759 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GALNT3Q14435 633 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CBWD5Q5RIA9 395 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MIS18BP1Q6P0N0 1132 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 OLFML1Q6UWY5 402 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 HAUS6Q7Z4H7 955 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ZNF280BQ86YH2 543 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SIAH1Q8IUQ4 282 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 UBQLNLQ8IYU4 475 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SYCE1Q8N0S2 351 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GALNT4Q8N4A0 578 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 NEDD1Q8NHV4 660 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LINGO1Q96FE5 620 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PERPQ96FX8 193 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ZC3H10Q96K80 434 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 CEP295NLQ96MC4 621 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 HSPA12BQ96MM6 686 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 FOXB1Q99853 325 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RANGRFQ9HD47 186 aaPredicted RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 FAM114A2Q9NRY5 505 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 THAP1Q9NVV9 213 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CLIP2Q9UDT6 1046 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 M0QYT0 321 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RANBP6O60518 1105 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 SCAF4O95104 1147 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 ZNF205O95201 554 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 A1BGP04217 495 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 NR2F1P10589 423 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CLUP10909 449 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MYF6P23409 242 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PKLRP30613 574 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SORDQ00796 357 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CD83Q01151 205 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms