RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 APOC2P02655 101 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 COL9A1P20849 921 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 CCNCP24863 283 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 RFTN1Q14699 578 aaPredicted RBP15.19■□□□□ 0.02
SUMO1-203ENST00000392246 C9orf64Q5T6V5 341 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 C22orf39Q6P5X5 142 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 PCDH20Q8N6Y1 951 aaKnown RBP15.19■□□□□ 0.02
SUMO1-203ENST00000392246 CCNYQ8ND76 341 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 TSTD1Q8NFU3 115 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 OLFM3Q96PB7 478 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 BRD8Q9H0E9 1235 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 FBRSQ9HAH7 460 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 CD248Q9HCU0 757 aa15.19■□□□□ 0.02
SUMO1-203ENST00000392246 PRMT8Q9NR22 394 aaPredicted RBP15.19■□□□□ 0.02
SUMO1-203ENST00000392246 SAE1Q9UBE0 346 aaPredicted RBP15.19■□□□□ 0.02
SUMO1-203ENST00000392246 FCF1Q9Y324 198 aaKnown RBP15.19■□□□□ 0.02
SUMO1-203ENST00000392246 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 SIN3BO75182 1162 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 ZNF821O75541 412 aaPredicted RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 TMCC1O94876 653 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 ATP1A1P05023 1023 aaKnown RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 VAV1P15498 845 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 RECQLP46063 649 aaPredicted RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 ZNF33AQ06730 810 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 PPIDQ08752 370 aaKnown RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 Q6ZVU0 165 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 PLPP6Q8IY26 295 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 TTC13Q8NBP0 860 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 OR2T3Q8NH03 318 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 FATE1Q969F0 183 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 HAUS1Q96CS2 278 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 PBKQ96KB5 322 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 CCDC114Q96M63 670 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 HHIPQ96QV1 700 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 FBXO4Q9UKT5 387 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
SUMO1-203ENST00000392246 ZNF318Q5VUA4 2279 aa15.18■□□□□ 0.02
SUMO1-203ENST00000392246 K7ESF4 209 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 MATN3O15232 486 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 APBB3O95704 486 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 PEX11BO96011 259 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 HOXA6P31267 233 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CXCR5P32302 372 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 RENBPP51606 427 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 SNRPD1P62314 119 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 AP1B1Q10567 949 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 KLF1Q13351 362 aaPredicted RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 HNRNPDQ14103 355 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 ELAVL3Q14576 367 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CYTH1Q15438 398 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 SLC13A5Q86YT5 568 aaPredicted RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 MAML2Q8IZL2 1156 aaPredicted RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 BBS5Q8N3I7 341 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 ERLEC1Q96DZ1 483 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 WDR24Q96S15 920 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 LGMNQ99538 433 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 SEPT3Q9UH03 358 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 MCF2LO15068 1137 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 GALR2O43603 387 aaPredicted RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 BNIP3LO60238 219 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CEP104O60308 925 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 RNASEH1O60930 286 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 GSRP00390 522 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 COPAP53621 1224 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 RHOAP61586 193 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 OTUD4Q01804 1114 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CSTF1Q05048 431 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 SLC10A7Q0GE19 358 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 XRCC4Q13426 336 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 TMPRSS6Q8IU80 811 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 STK40Q8N2I9 435 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 OR2A12Q8NGT7 310 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 ACTL9Q8TC94 416 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 LRRN4Q8WUT4 740 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 TFB1MQ8WVM0 346 aaKnown RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 HMGB4Q8WW32 186 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 MAML1Q92585 1016 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 CINPQ9BW66 212 aaPredicted RBP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 TM6SF2Q9BZW4 377 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
SUMO1-203ENST00000392246 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
SUMO1-203ENST00000392246 ALOX15BO15296 676 aa15.16■□□□□ 0.02
SUMO1-203ENST00000392246 IGSF6O95976 241 aa15.16■□□□□ 0.02
SUMO1-203ENST00000392246 CCNB1P14635 433 aa15.16■□□□□ 0.02
SUMO1-203ENST00000392246 GABRG2P18507 467 aa15.16■□□□□ 0.02
SUMO1-203ENST00000392246 HSPA9P38646 679 aaKnown RBP15.16■□□□□ 0.02
SUMO1-203ENST00000392246 MMP13P45452 471 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms