RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 SPRP35270 261 aaPredicted RBP18.3■□□□□ 0.52
ERCC2-201ENST00000391941 SH2D4BQ5SQS7 431 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 GRTP1Q5TC63 336 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 SMYD5Q6GMV2 418 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 TMEM102Q8N9M5 508 aaPredicted RBP18.3■□□□□ 0.52
ERCC2-201ENST00000391941 GAB3Q8WWW8 586 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 NXNL1Q96CM4 212 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 C11orf84Q9BUA3 381 aaPredicted RBP18.3■□□□□ 0.52
ERCC2-201ENST00000391941 MLPHQ9BV36 600 aaPredicted RBP18.3■□□□□ 0.52
ERCC2-201ENST00000391941 NOL11Q9H8H0 719 aaKnown RBP18.3■□□□□ 0.52
ERCC2-201ENST00000391941 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 CEPT1Q9Y6K0 416 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 CITO14578 2027 aa18.3■□□□□ 0.52
ERCC2-201ENST00000391941 TNFAIP8O95379 198 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 TGFB3P10600 412 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 CDH2P19022 906 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 PTPN3P26045 913 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 PPARGP37231 505 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 PTK2BQ14289 1009 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 TICAM1Q8IUC6 712 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 NUP93Q8N1F7 819 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 TRPM4Q8TD43 1214 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 EPB41L1Q9H4G0 881 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 PRMT7Q9NVM4 692 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 FZD10Q9ULW2 581 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 DLX3O60479 287 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 MCF2P10911 925 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 CD68P34810 354 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 PTPN9P43378 593 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 NDST2P52849 883 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 RPL26P61254 145 aaKnown RBP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 POU6F1Q14863 301 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 ANKDD1AQ495B1 522 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 TRIML2Q8N7C3 387 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 LRCH3Q96II8 777 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.29■□□□□ 0.52
ERCC2-201ENST00000391941 GIMAP2Q9UG22 337 aa18.29■□□□□ 0.52
ERCC2-201ENST00000391941 ACOT8O14734 319 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TRMUO75648 421 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TIPRLO75663 272 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 NFKB1P19838 968 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PDAP1Q13442 181 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 NAB1Q13506 487 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 C16orf89Q6UX73 402 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TRIM74Q86UV6 250 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TRIM73Q86UV7 250 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CENPIQ92674 756 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PPWD1Q96BP3 646 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 ERLEC1Q96DZ1 483 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TRPC7Q9HCX4 862 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 NDUFA13Q9P0J0 144 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PDLIM1O00151 329 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 MT-CYBP00156 380 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 ZNF26P17031 533 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 EMP3P54852 163 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 ITPRIPL1Q6GPH6 555 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TRIM67Q6ZTA4 783 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CLEC14AQ86T13 490 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TSPAN14Q8NG11 270 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 SERPINI1Q99574 410 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TMEM79Q9BSE2 394 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 MRPS26Q9BYN8 205 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 SPATC1LQ9H0A9 340 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 SLC2A6Q9UGQ3 507 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TMCO1Q9UM00 188 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CDYLQ9Y232 598 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PRSS51A0A1B0GVH4 220 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TOMM70O94826 608 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 KCNA5P22460 613 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 GNL1P36915 607 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 ADARP55265 1226 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 POU5F1BQ06416 359 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 NOMO2Q5JPE7 1267 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CNSTQ6PJW8 725 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PLPPR4Q7Z2D5 763 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 PIGZQ86VD9 579 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CENPLQ8N0S6 344 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 HMGCLL1Q8TB92 370 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 KLRG1Q96E93 195 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 TMEM165Q9HC07 324 aa18.28■□□□□ 0.52
ERCC2-201ENST00000391941 FBRSL1Q9HCM7 1045 aaKnown RBP18.28■□□□□ 0.52
ERCC2-201ENST00000391941 DOCK1Q14185 1865 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 SHROOM3Q8TF72 1996 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 SAC3D1A6NKF1 404 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 ZNF839A8K0R7 811 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 TSPAN1O60635 241 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 PSMC3P17980 439 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 ERCC2P18074 760 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 MAGEA12P43365 314 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 TNFAIP2Q03169 654 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 PPIDQ08752 370 aaKnown RBP18.27■□□□□ 0.52
ERCC2-201ENST00000391941 SH3D19Q5HYK7 790 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 TSTD2Q5T7W7 516 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 METTL21CQ5VZV1 264 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 EXOC8Q8IYI6 725 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms