RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 HOXB6P17509 224 aaKnown RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 HIRAP54198 1017 aaPredicted RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 SPIDRQ14159 915 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF470Q6ECI4 717 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 C6orf89Q6UWU4 347 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 HPS1Q92902 700 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 TINF2Q9BSI4 451 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 IL22Q9GZX6 179 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 PLA2G6O60733 806 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 CRTAMO95727 393 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 PPP3CCP48454 512 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ANXA11P50995 505 aaKnown RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF135P52742 658 aaPredicted RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 TWF1Q12792 350 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 LRP10Q7Z4F1 713 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 BPIFB6Q8NFQ5 453 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 PROX1Q92786 737 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 APBA2Q99767 749 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 SERHL2Q9H4I8 314 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 SERHLQ9NQF3 203 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 DPP7Q9UHL4 492 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 POU6F1Q14863 301 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 GRIK5Q16478 980 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 INSCQ1MX18 579 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 ZPBP2Q6X784 338 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 SLC30A10Q6XR72 485 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 TBC1D19Q8N5T2 526 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 TNFRSF25Q93038 417 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 HDHD2Q9H0R4 259 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 SFMBT1Q9UHJ3 866 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 CYP3A4P08684 503 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 FCHO2Q0JRZ9 810 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 NLGN2Q8NFZ4 835 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 CDH19Q9H159 772 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 LEF1Q9UJU2 399 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 NCF1BA6NI72 391 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 NCF1CA8MVU1 366 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 LSM1O15116 133 aaKnown RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 ODC1P11926 461 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 NCF1P14598 390 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 DENND5AQ6IQ26 1287 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 BRSK2Q8IWQ3 736 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 HAS1Q92839 578 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 TEKT5Q96M29 485 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 KANSL3Q9P2N6 904 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 RAPGEFL1Q9UHV5 662 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 CRLS1Q9UJA2 301 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 CHD2O14647 1828 aaKnown RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 PARNO95453 639 aaKnown RBP19.94■□□□□ 0.78
SHANK1-203ENST00000391813 SLC2A4P14672 509 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 PRDX6P30041 224 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 GRIA4P48058 902 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 CNTN1Q12860 1018 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 ATG14Q6ZNE5 492 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 TAS2R1Q9NYW7 299 aa19.94■□□□□ 0.78
SHANK1-203ENST00000391813 VIRMAQ69YN4 1812 aaKnown RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 CRHR1P34998 444 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 CDC16Q13042 620 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 MAP2K5Q13163 448 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 HIST2H2ACQ16777 129 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 MFSD4BQ5TF39 518 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 LIPMQ5VYY2 423 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 HIST2H2AA3Q6FI13 130 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 ADGRD1Q6QNK2 874 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 RERGLQ9H628 205 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 TSPAN16Q9UKR8 245 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 FADS3Q9Y5Q0 445 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 PARP4Q9UKK3 1724 aaKnown RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 FAM220BPB1ANY3 271 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 NADKO95544 446 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 ERVK-10P10266 1014 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 MLNP12872 115 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 INSRRP14616 1297 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 FSCN1Q16658 493 aaKnown RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 HPS6Q86YV9 775 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 C4orf32Q8N8J7 132 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 CENPIQ92674 756 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 TUBGCP5Q96RT8 1024 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 MAF1Q9H063 256 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 PEX11AO75192 247 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 ASMTLO95671 621 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 GUCA1CO95843 209 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 ZBTB48P10074 688 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-203ENST00000391813 ACSBG2Q5FVE4 666 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 IKBIPQ70UQ0 350 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 TBC1D21Q8IYX1 336 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 REPS2Q8NFH8 660 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 SEMA4DQ92854 862 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 TRIM39Q9HCM9 518 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 NUDT5Q9UKK9 219 aa19.93■□□□□ 0.78
SHANK1-203ENST00000391813 NOL4O94818 638 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ADSLP30566 484 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ATN1P54259 1190 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF57Q68EA5 555 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TATDN1Q6P1N9 297 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ATP6V0D2Q8N8Y2 350 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF317Q96PQ6 595 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 RPRD1BQ9NQG5 326 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms