RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PSTKQ8IV42 348 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 VSTM4Q8IW00 320 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 UMODL1-AS1Q8N2C9 162 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZCCHC9Q8N567 271 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 PCDH20Q8N6Y1 951 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 PIP4K2CQ8TBX8 421 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 EPAS1Q99814 870 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 OMDQ99983 421 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 NCAPGQ9BPX3 1015 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZDHHC5Q9C0B5 715 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 KLC2Q9H0B6 622 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 KDM4CQ9H3R0 1056 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 EBF2Q9HAK2 575 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 MRPL47Q9HD33 250 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 DNAI1Q9UI46 699 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ACTL7AQ9Y615 435 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 SCINQ9Y6U3 715 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 WASF2Q9Y6W5 498 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 FRYQ5TBA9 3013 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 A0A1W2PPC4 97 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 LRRC72A6NJI9 287 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 FGF10O15520 208 aaPredicted RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 PLRG1O43660 514 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 RAMP2O60895 175 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 RNF8O76064 485 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 TPM3P06753 285 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 CSRP1P21291 193 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 HCAR3P49019 387 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 TAS2R38P59533 333 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 CNTN1Q12860 1018 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 GRIK2Q13002 908 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 TRIM14Q14142 442 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 POLD3Q15054 466 aaPredicted RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 PIP5KL1Q5T9C9 394 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 AGBL4Q5VU57 503 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 DAB2IPQ5VWQ8 1189 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 ALKBH5Q6P6C2 394 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 DPY19L3Q6ZPD9 716 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 VPS36Q86VN1 386 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 MINDY1Q8N5J2 469 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 NIPA2Q8N8Q9 360 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 CHST14Q8NCH0 376 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR8K1Q8NGG5 319 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 ARRDC3Q96B67 414 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 SNRNP25Q9BV90 132 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 THAP2Q9H0W7 228 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 LRRC19Q9H756 370 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 TM9SF3Q9HD45 589 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 TPX2Q9ULW0 747 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 AP4E1Q9UPM8 1137 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 AKAP13Q12802 2813 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 MAP1BP46821 2468 aaKnown RBP11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 EPG5Q9HCE0 2579 aa11.62□□□□□ -0.55
IGHV4-28-201ENST00000390612 SSU72P8A0A1W2PR75 194 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 C1QTNF3-AMACRE9PGA6 284 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 PLK4O00444 970 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 CREB3O43889 395 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 KCNK5O95279 499 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 CD59P13987 128 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 DESP17661 470 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 IL1R2P27930 398 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 EIF4A3P38919 411 aaKnown RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 MAPK8P45983 427 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 GRIA4P48058 902 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 AFF3P51826 1226 aaKnown RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 GEMIN4P57678 1058 aaKnown RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 SERINC3Q13530 473 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 PARP15Q460N3 678 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 INO80DQ53TQ3 878 aaPredicted RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 CARD16Q5EG05 197 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 PPM1JQ5JR12 505 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 AFMIDQ63HM1 303 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 SARM1Q6SZW1 724 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 RNF214Q8ND24 703 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR2I1PQ8NGU4 316 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 GANCQ8TET4 914 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 HMCESQ96FZ2 354 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 CCDC114Q96M63 670 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 KCTD15Q96SI1 283 aaPredicted RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 MIR1-1HGQ9H1L0 117 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 CATSPERBQ9H7T0 1116 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 MYO1AQ9UBC5 1043 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 PCSK1NQ9UHG2 260 aa11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 FARP1Q9Y4F1 1045 aaPredicted RBP11.61□□□□□ -0.55
IGHV4-28-201ENST00000390612 A0A1W2PR77 199 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 RASA4BC9J798 803 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 RASA4O43374 803 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms