RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 GRIP2Q9C0E4 1043 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 POLR1EQ9GZS1 481 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 RHOJQ9H4E5 214 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 CAB39LQ9H9S4 337 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 TUBGCP4Q9UGJ1 667 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 SYNCRIPO60506 623 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 ENDOD1O94919 500 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 CFHP08603 1231 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 NOVP48745 357 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 TRPC1P48995 793 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 CCDC81Q6ZN84 652 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 FBXW8Q8N3Y1 598 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 NAT8LQ8N9F0 302 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 TSPAN18Q96SJ8 248 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 VPS28Q9UK41 221 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 LBPP18428 481 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 MAPK1P28482 360 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 KHDC1Q4VXA5 237 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 OTUD3Q5T2D3 398 aaPredicted RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 EMC10Q5UCC4 262 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 RRM2BQ7LG56 351 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 ACOX2Q99424 681 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 NMRK2Q9NPI5 230 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 PAIP2BQ9ULR5 123 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 C15orf38-AP3S2A0A0A6YYH1 394 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 MFSD11O43934 449 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 CCNG1P51959 295 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 RAD23AP54725 363 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 KLF10Q13118 480 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 CERCAMQ5T4B2 595 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 POTEHQ6S545 545 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 ARPINQ7Z6K5 226 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 TTC7BQ86TV6 843 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 METTL6Q8TCB7 284 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 KANSL3Q9P2N6 904 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
PTPRN2-201ENST00000389413 ZSCAN9O15535 394 aaPredicted RBP16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 AKR1A1P14550 325 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 SLC2A4P14672 509 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 PPP3CCP48454 512 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 BLMHQ13867 455 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 ISLR2Q6UXK2 745 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 MCRS1Q96EZ8 462 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 CLPTM1LQ96KA5 538 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 TRIM45Q9H8W5 580 aaPredicted RBP16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 S100A14Q9HCY8 104 aa16.33■□□□□ 0.21
PTPRN2-201ENST00000389413 A0A087WXM4 84 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 TFEBP19484 476 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 TKTP29401 623 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 BEX3Q00994 111 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 SLC39A12Q504Y0 691 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 FAM126BQ8IXS8 530 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 CARNMT1Q8N4J0 409 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 DHRSXQ8N5I4 330 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PCSK9Q8NBP7 692 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PGLYRP2Q96PD5 576 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 SPAG4Q9NPE6 437 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 BTN3A1O00481 513 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 CD86P42081 329 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 RPL5P46777 297 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 LRRC74AQ0VAA2 488 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PFKFB4Q16877 469 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 TEX44Q53QW1 395 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 CAMK1DQ8IU85 385 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 CDK5RAP1Q96SZ6 601 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 DYRK4Q9NR20 520 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 SIN3BO75182 1162 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 TCF4P15884 667 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 NEK2P51955 445 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 FAM35AQ86V20 835 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 CMASQ8NFW8 434 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 STAG3L4Q8TBR4 150 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 FAM120BQ96EK7 910 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 RNF145Q96MT1 663 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 FZD8Q9H461 694 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 ATP13A1Q9HD20 1204 aa16.33■□□□□ 0.2
PTPRN2-201ENST00000389413 PGM3O95394 542 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 TRAF2Q12933 501 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 METTL21CQ5VZV1 264 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 TXNRD3NBQ6F5E7 133 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 GLT6D1Q7Z4J2 308 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 CLVS1Q8IUQ0 354 aaPredicted RBP16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 DDX1Q92499 740 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 NDNQ99608 321 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 DPY30Q9C005 99 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 ZNF536O15090 1300 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 SMIM28A0A1B0GU29 152 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 PLIN3O60664 434 aa16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
PTPRN2-201ENST00000389413 NEK3P51956 506 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms