RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 THOP1P52888 689 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 GYS2P54840 703 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PEX3P56589 373 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SLC9A5Q14940 896 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CCNYL2Q5T2Q4 361 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 RSBN1Q5VWQ0 802 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CEP68Q76N32 757 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM139Q8IV31 216 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SIMC1Q8NDZ2 872 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 INPP4AQ96PE3 977 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 GON7Q9BXV9 100 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 THG1LQ9NWX6 298 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 THUMPD1Q9NXG2 353 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 FCHO1O14526 889 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SCAMP1O15126 338 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 KPNA6O60684 536 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PEX11AO75192 247 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ARSEP51690 589 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 NOGQ13253 232 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 VWA5B1Q5TIE3 1220 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 STK32CQ86UX6 486 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MRPS31Q92665 395 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MYLPFQ96A32 169 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 OMA1Q96E52 524 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CYP3A43Q9HB55 503 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ANKEF1Q9NU02 776 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 VANGL2Q9ULK5 521 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PCDHGB6Q9Y5F9 930 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MYPNQ86TC9 1320 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 F5H6K3 240 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 H3BMM5 538 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AKAP10O43572 662 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SRP54P61011 504 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 KLRC3Q07444 240 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SLC12A1Q13621 1099 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 RNF149Q8NC42 400 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FAF2Q96CS3 445 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 REPS1Q96D71 796 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 HERC2P3Q9BVR0 1158 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 NUSAP1Q9BXS6 441 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 GPN1Q9HCN4 374 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ADA2Q9NZK5 511 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SH3BP4Q9P0V3 963 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TNS2Q63HR2 1409 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TCF4P15884 667 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PCSK1P29120 753 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MESDQ14696 234 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MAPRE1Q15691 268 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 DPY19L1Q2PZI1 675 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 QRICH1Q2TAL8 776 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CES5AQ6NT32 575 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CYP4F22Q6NT55 531 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 C1orf52Q8N6N3 182 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ARL5BQ96KC2 179 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MCCC1Q96RQ3 725 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 RIT2Q99578 217 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MRI1Q9BV20 369 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CDC42EP4Q9H3Q1 356 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SPTAN1Q13813 2472 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TTC34A8MYJ7 566 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TSPAN1O60635 241 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 EGFRP00533 1210 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ETV1P50549 477 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 DGKZQ13574 1117 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 HNRNPDQ14103 355 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CLPPQ16740 277 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 LMBRD2Q68DH5 695 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ANKS1BQ7Z6G8 1248 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM47Q9BQJ4 181 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 THTPAQ9BU02 230 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TBC1D10AQ9BXI6 508 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MROH8Q9H579 483 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 LRRC40Q9H9A6 602 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MORF4L1Q9UBU8 362 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ARHGEF33A8MVX0 844 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ALDH1A2O94788 518 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CTPS1P17812 591 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 AOC1P19801 751 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 HNF4AP41235 474 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 CACNB2Q08289 660 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ELAVL2Q12926 359 aaKnown RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM132DQ14C87 1099 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 PET117Q6UWS5 81 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 P3H2Q8IVL5 708 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF34Q8IZ26 560 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 LRRC17Q8N6Y2 441 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 FAM47BQ8NA70 645 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF507Q8TCN5 953 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 EPS8L1Q8TE68 723 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 SOCS4Q8WXH5 440 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 C18orf8Q96DM3 657 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF597Q96LX8 424 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 ERMAPQ96PL5 475 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 MED15Q96RN5 788 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
PTPRD-203ENST00000381196 HMX1Q9NP08 348 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-203ENST00000381196 DNPEPQ9ULA0 475 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms