RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 NNMTP40261 264 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 E2F5Q15329 346 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 HNRNPA1L2Q32P51 320 aaKnown RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 HSF5Q4G112 596 aaPredicted RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 SDE2Q6IQ49 451 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 FBXL6Q8N531 539 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 TMEM105Q8N8V8 129 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
SMN2-203ENST00000380743 MMP17Q9ULZ9 603 aa12.9□□□□□ -0.34
SMN2-203ENST00000380743 CES2O00748 559 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
SMN2-203ENST00000380743 MATN3O15232 486 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 ATG13O75143 517 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 TMCC1O94876 653 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
SMN2-203ENST00000380743 CLCN6P51797 869 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 SLC10A7Q0GE19 358 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 AP1B1Q10567 949 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 CYTH1Q15438 398 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 SIX1Q15475 284 aaPredicted RBP12.89□□□□□ -0.35
SMN2-203ENST00000380743 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 Q6ZVU0 165 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 SPEM1Q8N4L4 309 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 PTPRN2Q92932 1015 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
SMN2-203ENST00000380743 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 TNKS2Q9H2K2 1166 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 TTC7AQ9ULT0 858 aaPredicted RBP12.89□□□□□ -0.35
SMN2-203ENST00000380743 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
SMN2-203ENST00000380743 KCNK1O00180 336 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 GPR37L1O60883 481 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SIN3BO75182 1162 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 HOXB2P14652 356 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 COL9A1P20849 921 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 MAGEA9P43362 315 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 XRCC4Q13426 336 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 CRY1Q16526 586 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TSEN2Q8NCE0 465 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TFB1MQ8WVM0 346 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 CASKIN2Q8WXE0 1202 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 ATG4AQ8WYN0 398 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 MAML1Q92585 1016 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 FATE1Q969F0 183 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 ISG20Q96AZ6 181 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 QKIQ96PU8 341 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMN2-203ENST00000380743 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SUN2Q9UH99 717 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 EDDM13A0A1B0GTR0 161 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 H7C0C1 242 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 MUSKO15146 869 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 BNIP3LO60238 219 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 RBP3P10745 1247 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 CCNB1P14635 433 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 ATP5OP48047 213 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SATB1Q01826 763 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TIGD7Q6NT04 549 aaPredicted RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TEX26Q8N6G2 289 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
SMN2-203ENST00000380743 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 TM6SF2Q9BZW4 377 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 LHX3Q9UBR4 397 aa12.88□□□□□ -0.35
SMN2-203ENST00000380743 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms