RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SSX2IPQ9Y2D8 614 aa7.5□□□□□ -1.21
GPCPD1-201ENST00000379019 PRORSD1PA6NEY8 169 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PSTPIP1O43586 416 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 MAGEC1O60732 1142 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ASS1P00966 412 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 OXTRP30559 389 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 GPD2P43304 727 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 MTTPP55157 894 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PIGFQ07326 219 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 NSUN2Q08J23 767 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CUL3Q13618 768 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 N4BP2L1Q5TBK1 243 aaPredicted RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 DRICH1Q6PGQ1 229 aaPredicted RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 LCA5Q86VQ0 697 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CTAGE3PQ8IX95 158 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 VPS52Q8N1B4 723 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ITCHQ96J02 903 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 IFT74Q96LB3 600 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 HAUS8Q9BT25 410 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SACM1LQ9NTJ5 587 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM49BQ9NUQ9 324 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 AGO1Q9UL18 857 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 LRRC14BA6NHZ5 514 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ITGB6P18564 788 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PRKCHP24723 683 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PPM1AP35813 382 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 RASSF2P50749 326 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM189BP81408 668 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CREMQ03060 361 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM187BQ17R55 369 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 LAIR1Q6GTX8 287 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SLC22A15Q8IZD6 547 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 C1orf127Q8N9H9 656 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 STKLD1Q8NE28 680 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 MCMBPQ9BTE3 642 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ST6GALNAC4Q9H4F1 302 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ZNF385DQ9H6B1 395 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 MOCS1Q9NZB8 636 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ZNF212Q9UDV6 495 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PARP2Q9UGN5 583 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 A0A0U1RQS6 177 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TTC24A2A3L6 582 aaPredicted RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TCAF2A6NFQ2 919 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 PMM2O15305 246 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 GBP1P32455 592 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 EFNA5P52803 228 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 YWHAGP61981 247 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CCDC6Q16204 474 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SOWAHAQ2M3V2 549 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ACAD11Q709F0 780 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 C14orf80Q86SX3 495 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TTC30AQ86WT1 665 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TTC13Q8NBP0 860 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM81BQ96LP2 452 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 XAB2Q9HCS7 855 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 LARSQ9P2J5 1176 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CDY2AQ9Y6F7 541 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 UBFD1O14562 309 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CCNT2O60583 730 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 CXCL8P10145 99 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 STX3Q13277 289 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 C6orf10Q5SRN2 563 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 MARCH8Q5T0T0 291 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 DCLRE1AQ6PJP8 1040 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 RTL10Q7L3V2 364 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 GPD1LQ8N335 351 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 TEX37Q96LM6 180 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 IMPG2Q9BZV3 1241 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 POLR3FQ9H1D9 316 aaPredicted RBP7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 SETD4Q9NVD3 440 aa7.49□□□□□ -1.21
GPCPD1-201ENST00000379019 ARHGAP10A1A4S6 786 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 INHBBP09529 407 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 FDFT1P37268 417 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 GLRBP48167 497 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 EIF3EP60228 445 aaKnown RBP7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 PPP1R8Q12972 351 aaKnown RBP7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 SETDB1Q15047 1291 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM35AQ86V20 835 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 NT5DC4Q86YG4 428 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 CEP97Q8IW35 865 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 FBXO22Q8NEZ5 403 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 C3orf30Q96M34 536 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 RAB3IPQ96QF0 476 aaPredicted RBP7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 DCUN1D5Q9BTE7 237 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 TMEM161AQ9NX61 479 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 UBP1Q9NZI7 540 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 SHOC2Q9UQ13 582 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 ZWINTO95229 277 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 BDNFP23560 247 aa7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 GNL1P36915 607 aaPredicted RBP7.48□□□□□ -1.21
GPCPD1-201ENST00000379019 CSRP3P50461 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms