RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 PCDH19Q8TAB3 1148 aa13.9□□□□□ -0.18
KIF3A-201ENST00000378735 PPWD1Q96BP3 646 aaKnown RBP13.9□□□□□ -0.18
KIF3A-201ENST00000378735 MAELQ96JY0 434 aaKnown RBP13.9□□□□□ -0.18
KIF3A-201ENST00000378735 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
KIF3A-201ENST00000378735 TPK1Q9H3S4 243 aa13.9□□□□□ -0.18
KIF3A-201ENST00000378735 SPAG4Q9NPE6 437 aa13.9□□□□□ -0.18
KIF3A-201ENST00000378735 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
KIF3A-201ENST00000378735 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 GRIA1P42261 906 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 IREB2P48200 963 aaKnown RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 GSSP48637 474 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 HNRNPFP52597 415 aaKnown RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CACNB3P54284 484 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 TRAF2Q12933 501 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 LRP8Q14114 963 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ZYG11AQ6WRX3 759 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 PLD6Q8N2A8 252 aaKnown RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 RAB2BQ8WUD1 216 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 OTUD5Q96G74 571 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 C9orf16Q9BUW7 83 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CKMT2P17540 419 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 AGAP7PQ5VUJ5 663 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 KCTD8Q6ZWB6 473 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ZUFSPQ96AP4 578 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 QKIQ96PU8 341 aaKnown RBP eCLIP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 PSME2Q9UL46 239 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 TRPC5OSA6NMA1 111 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 LSM1O15116 133 aaKnown RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CABYRO75952 493 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CHRNGP07510 517 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 GNAO1P09471 354 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ASPAP45381 313 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 HLCSP50747 726 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 GALNT18Q6P9A2 607 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 TTC30BQ8N4P2 665 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 OR2T34Q8NGX1 318 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 OR2T3Q8NH03 318 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 ALPK1Q96QP1 1244 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 NANOGQ9H9S0 305 aa13.89□□□□□ -0.19
KIF3A-201ENST00000378735 CCM2LQ9NUG4 571 aaPredicted RBP13.89□□□□□ -0.19
KIF3A-201ENST00000378735 FAM47E-STBD1D6RA91 191 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 PIGNO95427 931 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 POLBP06746 335 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ZNF182P17025 639 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 SURF1Q15526 300 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 KIZQ2M2Z5 673 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CERS2Q96G23 380 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 NSMCE3Q96MG7 304 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 DAPK2Q9UIK4 370 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ERVK-11Q9UQG0 969 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 A0A096LPK6 155 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CD19P15391 556 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 DNAJB1P25685 340 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 HADHAP40939 763 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ARL13AQ5H913 290 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 FAM102AQ5T9C2 384 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 TMEM198Q66K66 360 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 FAM45BPQ6NSW5 357 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 DNAJC14Q6Y2X3 702 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ZC3H7AQ8IWR0 971 aaKnown RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 FAM45AQ8TCE6 357 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 AGR3Q8TD06 166 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CLEC4DQ8WXI8 215 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 SLC45A3Q96JT2 553 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CACNA2D2Q9NY47 1150 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 TMEM181Q9P2C4 612 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 GABBR1Q9UBS5 961 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 SNX9Q9Y5X1 595 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 PRORSD1PA6NEY8 169 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 K7ERI5 159 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 MDM4O15151 490 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 TPD52L2O43399 206 aaKnown RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 SEC14L2O76054 403 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 RPL10P27635 214 aaKnown RBP13.88□□□□□ -0.19
KIF3A-201ENST00000378735 NAMPTP43490 491 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 GRIA4P48058 902 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 PCYT1AP49585 367 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 ATP6V0D1P61421 351 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 PELI3Q8N2H9 469 aa13.88□□□□□ -0.19
KIF3A-201ENST00000378735 CBR4Q8N4T8 237 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms