RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SLCO2A1Q92959 643 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 SLCO1B3Q9NPD5 702 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FBXO5Q9UKT4 447 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 SYCE1LA8MT33 242 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TMCC1O94876 653 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 CDK7P50613 346 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 ABCE1P61221 599 aaKnown RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 MTFR1Q15390 333 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 EFL1Q7Z2Z2 1120 aaKnown RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TMEM130Q8N3G9 435 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 MAB21L3Q8N8X9 362 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 HJURPQ8NCD3 748 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 SMG8Q8ND04 991 aaKnown RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 KCTD13Q8WZ19 329 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FAR2Q96K12 515 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FOXO6A8MYZ6 492 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 CAPRIN1Q14444 709 aaKnown RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 CST9Q5W186 159 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 PLK2Q9NYY3 685 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 FAM50BQ9Y247 325 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 LAMB1P07942 1786 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 TMEM63AO94886 807 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SERPINB5P36952 375 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 PDK4Q16654 411 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SDE2Q6IQ49 451 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 KRT80Q6KB66 452 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 PACS1Q6VY07 963 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 CTU1Q7Z7A3 348 aaKnown RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SUGP1Q8IWZ8 645 aaKnown RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SLC44A1Q8WWI5 657 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SMOQ99835 787 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 SLCO1B7G3V0H7 640 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 IRAK2O43187 625 aa14.71□□□□□ -0.05
TCOF1-202ENST00000377797 ZNF7P17097 686 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 ATXN3P54252 364 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 MRPS23Q9Y3D9 190 aaKnown RBP14.71□□□□□ -0.05
TCOF1-202ENST00000377797 TCN1P20061 433 aaPredicted RBP14.71□□□□□ -0.06
TCOF1-202ENST00000377797 SERPINB3P29508 390 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 SERPINA4P29622 427 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 CORO1AP31146 461 aaKnown RBP14.71□□□□□ -0.06
TCOF1-202ENST00000377797 NAGLUP54802 743 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 PRKAA1Q13131 559 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 IRF5Q13568 498 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 SZRD1Q7Z422 152 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 GLIS1Q8NBF1 620 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 MLPHQ9BV36 600 aaPredicted RBP14.71□□□□□ -0.06
TCOF1-202ENST00000377797 TMEM109Q9BVC6 243 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 SCN9AQ15858 1988 aa14.71□□□□□ -0.06
TCOF1-202ENST00000377797 CLDN11O75508 207 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 GLUD1P00367 558 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 NQO1P15559 274 aaKnown RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 FMO4P31512 558 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 SPATA22Q8NHS9 363 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 NTAN1Q96AB6 310 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 TSEN34Q9BSV6 310 aaKnown RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 ARHGAP26Q9UNA1 814 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CNTN6Q9UQ52 1028 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 SLC4A7Q9Y6M7 1214 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 MBLAC1A4D2B0 266 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 MEIS3P2A8K0S8 358 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 FCHO1O14526 889 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 TACR2P21452 398 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 NUDT2P50583 147 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 YBEYP58557 167 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 SLC22A9Q8IVM8 553 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 ACMSDQ8TDX5 336 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 OXCT2Q9BYC2 517 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 VPS45Q9NRW7 570 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 AGO1Q9UL18 857 aaKnown RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 ANKRD6Q9Y2G4 727 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 SRRM3A6NNA2 597 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CLASP2O75122 1294 aaKnown RBP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 FAM155BO75949 473 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 TBX18O95935 607 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CYBAP13498 195 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 ABL2P42684 1182 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 APLP1P51693 650 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 C16orf89Q6UX73 402 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CMC1Q7Z7K0 106 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 IL1RAPL1Q9NZN1 696 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 METTL18O95568 372 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 AP2A1O95782 977 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CCNCP24863 283 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 PLPP4Q5VZY2 271 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CYB5D1Q6P9G0 228 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 OTOAQ7RTW8 1153 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 SLC41A1Q8IVJ1 513 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 HDAC10Q969S8 669 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 IGFLR1Q9H665 355 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 IL1RL2Q9HB29 575 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.7□□□□□ -0.06
TCOF1-202ENST00000377797 IRAK4Q9NWZ3 460 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 CLUHO75153 1309 aa14.7□□□□□ -0.06
TCOF1-202ENST00000377797 KPNA3O00505 521 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PTPN3P26045 913 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms