RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CTAGE6Q86UF2 777 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 CTAGE4Q8IX94 777 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 PGBD5Q8N414 524 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 MNS1Q8NEH6 495 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 ZDHHC4Q9NPG8 344 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 SLCO3A1Q9UIG8 710 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 SLC25A13Q9UJS0 675 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 STARD13Q9Y3M8 1113 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 NEU2Q9Y3R4 380 aa21.68■■□□□ 1.06
CBWD3-202ENST00000377342 MTSS1O43312 755 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF821O75541 412 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 JCHAINP01591 159 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 ATP5BP06576 529 aaKnown RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 TNFRSF4P43489 277 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 VASPP50552 380 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 GEMIN4P57678 1058 aaKnown RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 CCINQ13939 588 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 RFTN1Q14699 578 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 INO80DQ53TQ3 878 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-202ENST00000377342 EMC10Q5UCC4 262 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 CCDC105Q8IYK2 499 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF567Q8N184 647 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 ATL2Q8NHH9 583 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 LHX3Q9UBR4 397 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 FBXL21Q9UKT6 434 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 A0A0C4DFX4 3053 aa21.67■■□□□ 1.06
CBWD3-202ENST00000377342 TIMM44O43615 452 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SRPRAP08240 638 aaKnown RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ETS1P14921 441 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 DRD1P21728 446 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 MMP13P45452 471 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 RGRP47804 291 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 GRSF1Q12849 480 aaKnown RBP eCLIP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF234Q14588 700 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 MARC1Q5VT66 337 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 C22orf39Q6P5X5 142 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SIX5Q8N196 739 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ATP11CQ8NB49 1132 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 TSEN2Q8NCE0 465 aaKnown RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 CCDC110Q8TBZ0 833 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 PSKH2Q96QS6 385 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 UHRF1Q96T88 793 aaPredicted RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ACOX2Q99424 681 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 THAP10Q9P2Z0 257 aaPredicted RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 C5orf60A6NFR6 353 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 MAN2B1O00754 1011 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ATP9BO43861 1147 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 ZSCAN5DPP0CG00 497 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 STIP1P31948 543 aaKnown RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 RENBPP51606 427 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SEC13P55735 322 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 STARD6P59095 220 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 MRPS25P82663 173 aaKnown RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SLC20A2Q08357 652 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 TEX44Q53QW1 395 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 FRS2Q8WU20 508 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 CASKIN2Q8WXE0 1202 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 EXOC4Q96A65 974 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 TEKT5Q96M29 485 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SPATA13Q96N96 652 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 RBM22Q9NW64 420 aaKnown RBP eCLIP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 SEPT3Q9UH03 358 aa21.66■■□□□ 1.06
CBWD3-202ENST00000377342 NDRG2Q9UN36 371 aaKnown RBP21.66■■□□□ 1.06
CBWD3-202ENST00000377342 TECTAO75443 2155 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF189O75820 626 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ECEL1O95672 775 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 IFNB1P01574 187 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 TARSP26639 723 aaKnown RBP21.65■■□□□ 1.06
CBWD3-202ENST00000377342 CD68P34810 354 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ZXDAP98168 799 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF235Q14590 738 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 DGKKQ5KSL6 1271 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ANKRD20A2Q5SQ80 823 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ANKRD20A1Q5TYW2 823 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ANKRD20A3Q5VUR7 823 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ZNF852Q6ZMS4 543 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 NUDT18Q6ZVK8 323 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 MMGT1Q8N4V1 131 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 NSMCE1Q8WV22 266 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 EXOC2Q96KP1 924 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 AGAP3Q96P47 875 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 VAT1Q99536 393 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 MGME1Q9BQP7 344 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 CINPQ9BW66 212 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-202ENST00000377342 TMEM245Q9H330 911 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 NT5MQ9NPB1 228 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 ATP8A1Q9Y2Q0 1164 aa21.65■■□□□ 1.06
CBWD3-202ENST00000377342 TTC34A8MYJ7 566 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 TTI1O43156 1089 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 ZBTB24O43167 697 aaPredicted RBP21.64■■□□□ 1.05
CBWD3-202ENST00000377342 RAD51CO43502 376 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 GCATO75600 419 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 GJB3O75712 270 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 HNRNPLP14866 589 aaKnown RBP eCLIP21.64■■□□□ 1.05
CBWD3-202ENST00000377342 IL12RB1P42701 662 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 MAXP61244 160 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 DR1Q01658 176 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 ENPP2Q13822 863 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 P3H1Q32P28 736 aa21.64■■□□□ 1.05
CBWD3-202ENST00000377342 GSTA5Q7RTV2 222 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms