RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 STARD3Q14849 445 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 RPLP0P6Q8NHW5 317 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 SLC35B2Q8TB61 432 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 MAML1Q92585 1016 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 NKD2Q969F2 451 aaPredicted RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 ISG20Q96AZ6 181 aaKnown RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 MRGPRX3Q96LB0 322 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 VAT1Q99536 393 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 RBM12Q9NTZ6 932 aaKnown RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 SEPT10Q9P0V9 454 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 CDC23Q9UJX2 597 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 R3HDM2Q9Y2K5 976 aaKnown RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
TIMP1-202ENST00000377017 STON1Q9Y6Q2 735 aa13.41□□□□□ -0.26
TIMP1-202ENST00000377017 MYO18AQ92614 2054 aaKnown RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 EDDM13A0A1B0GTR0 161 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 CHURC1-FNTBB4DL54 471 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 CCDC188H7C350 402 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 SLC34A2O95436 690 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 IGSF6O95976 241 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 MT-CO1P00395 513 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 IL12RB1P42701 662 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 MMP13P45452 471 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 RHOAP61586 193 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 ENPP2Q13822 863 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 SIX1Q15475 284 aaPredicted RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 DLG2Q15700 870 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 C22orf39Q6P5X5 142 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 LEKR1Q6ZMV7 388 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 IL17RCQ8NAC3 791 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 TXNDC5Q8NBS9 432 aaKnown RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 HTR3CQ8WXA8 447 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 CLDN23Q96B33 292 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 RUNDC3BQ96NL0 473 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 GABRG3Q99928 467 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 FAM118BQ9BPY3 351 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 TMEM245Q9H330 911 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 FBRSQ9HAH7 460 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 CACNA2D2Q9NY47 1150 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 FEZ2Q9UHY8 353 aaPredicted RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 SLCO3A1Q9UIG8 710 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 DNPEPQ9ULA0 475 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
TIMP1-202ENST00000377017 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
TIMP1-202ENST00000377017 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 TTC34A8MYJ7 566 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 KCNK1O00180 336 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 KCNN4O15554 427 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 ZBTB24O43167 697 aaPredicted RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 PHF2O75151 1096 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 CD160O95971 181 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 GSRP00390 522 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 ITGAVP06756 1048 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 EPHX1P07099 455 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 HOXB2P14652 356 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 VAV1P15498 845 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 RBL1P28749 1068 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 STIP1P31948 543 aaKnown RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 CHRNA3P32297 505 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 ACTN2P35609 894 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 FNTAP49354 379 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 CLCN5P51795 746 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 RAD51Q06609 339 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 SLC10A7Q0GE19 358 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 SNX1Q13596 522 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 TEX26Q8N6G2 289 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 MAGOHBQ96A72 148 aaKnown RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 MYO19Q96H55 970 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 GDAP1L1Q96MZ0 367 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 ACOX2Q99424 681 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 IL12RB2Q99665 862 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 CHRDQ9H2X0 955 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 RBM22Q9NW64 420 aaKnown RBP eCLIP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
TIMP1-202ENST00000377017 TRHDEQ9UKU6 1024 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 MMP17Q9ULZ9 603 aa13.39□□□□□ -0.27
TIMP1-202ENST00000377017 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms