RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CA4P22748 312 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 RPA3P35244 121 aaPredicted RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 MAXP61244 160 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 GNA12Q03113 381 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 MPP3Q13368 585 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 MARK2Q7KZI7 788 aaKnown RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 TAX1BP1Q86VP1 789 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 TMC8Q8IU68 726 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 OR52K2Q8NGK3 314 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 ZNF473Q8WTR7 871 aaKnown RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 ZNF669Q96BR6 464 aaPredicted RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 ALKBH8Q96BT7 664 aaKnown RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 IMP4Q96G21 291 aaKnown RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 CERS2Q96G23 380 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 SERAC1Q96JX3 654 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 MRGPRX2Q96LB1 330 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 KLF6Q99612 283 aaPredicted RBP17.98■□□□□ 0.47
CTTN-203ENST00000376561 FICDQ9BVA6 458 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 FSD1LQ9BXM9 530 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 LRRC3Q9BY71 257 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 STOML2Q9UJZ1 356 aa17.98■□□□□ 0.47
CTTN-203ENST00000376561 HIDE1A8MVS5 230 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 TRIM49D1C9J1S8 452 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 GOLGA8RI6L899 631 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 WDR4P57081 412 aaKnown RBP17.97■□□□□ 0.47
CTTN-203ENST00000376561 ZXDBP98169 803 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 ITKQ08881 620 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 ANKRD20A4Q4UJ75 823 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 PLPP4Q5VZY2 271 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 DENND5AQ6IQ26 1287 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 HS6ST3Q8IZP7 471 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
CTTN-203ENST00000376561 GDAP1Q8TB36 358 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 ADAMTS19Q8TE59 1207 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 DDX50Q9BQ39 737 aaKnown RBP17.97■□□□□ 0.47
CTTN-203ENST00000376561 CHRAC1Q9NRG0 131 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 SOX13Q9UN79 622 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 FAM169AQ9Y6X4 670 aa17.97■□□□□ 0.47
CTTN-203ENST00000376561 ZCWPW2A0A1B0GU75 182 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 A0A1B0GVM2 712 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 TCAF2A6NFQ2 919 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 C2orf71A6NGG8 1288 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 TSPAN3O60637 253 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 KRT38O76015 456 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 LATS1O95835 1130 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 GLUD1P00367 558 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 DNAJB1P25685 340 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 NUMBP49757 651 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 CYP4F8P98187 520 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 MGAT5Q09328 741 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 LBRQ14739 615 aaKnown RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 ZNF449Q6P9G9 518 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 SH2D5Q6ZV89 423 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 CHST9Q7L1S5 443 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 BANPQ8N9N5 519 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTTN-203ENST00000376561 OR7D4Q8NG98 312 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 POF1BQ8WVV4 589 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 CKAP2Q8WWK9 683 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 MRPS31Q92665 395 aaKnown RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 MFSD3Q96ES6 412 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 PDFQ9HBH1 243 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 IL1RAPL1Q9NZN1 696 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 CPQQ9Y646 472 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 GREM1O60565 184 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 ASMTLO95671 621 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 HOXD9P28356 352 aaPredicted RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 ETFBP38117 255 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 CCT5P48643 541 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 SERPINB9P50453 376 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 ZNF177Q13360 481 aaPredicted RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 NAB1Q13506 487 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 FRG1Q14331 258 aaKnown RBP17.96■□□□□ 0.47
CTTN-203ENST00000376561 TMCO4Q5TGY1 634 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 KDELC1Q6UW63 502 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 RANBP10Q6VN20 620 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 PGBD5Q8N414 524 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 SPPL3Q8TCT6 385 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 MTBPQ96DY7 904 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 SLC17A6Q9P2U8 582 aa17.96■□□□□ 0.47
CTTN-203ENST00000376561 ERVK-10P10266 1014 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 WNT3AP56704 352 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 DSC2Q02487 901 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 IL31Q6EBC2 164 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 ELMOD1Q8N336 334 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 KIFC1Q9BW19 673 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 TLR9Q9NR96 1032 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 VPS45Q9NRW7 570 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 ZFATQ9P243 1243 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 MIA3Q5JRA6 1907 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 MTCL1Q9Y4B5 1905 aaKnown RBP17.95■□□□□ 0.46
CTTN-203ENST00000376561 ILVBLA1L0T0 632 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 HMX2A2RU54 273 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 LINC01553A4QN01 128 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 SCAMP3O14828 347 aaKnown RBP17.95■□□□□ 0.46
CTTN-203ENST00000376561 ZWINTO95229 277 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 MMP2P08253 660 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 PYGBP11216 843 aa17.95■□□□□ 0.46
CTTN-203ENST00000376561 DRD4P21917 467 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms