RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 NUDCD3Q8IVD9 361 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 LINC01599Q8WXQ3 324 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 KLHL29Q96CT2 875 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 SLC13A1Q9BZW2 595 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 UGT1A7Q9HAW7 530 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 UGT1A10Q9HAW8 530 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 UGT1A8Q9HAW9 530 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 TLR6Q9Y2C9 796 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 PRG3Q9Y2Y8 225 aaPredicted RBP8.36□□□□□ -1.07
UBR4-202ENST00000375224 ASB3Q9Y575 518 aa8.36□□□□□ -1.07
UBR4-202ENST00000375224 A0A1W2PQH9 124 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 WASH4PA8MWX3 477 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 KCNU1A8MYU2 1149 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 DFFAO00273 331 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TIMM44O43615 452 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 KDM1AO60341 852 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CACNG3O60359 315 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ALDH2P05091 517 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 INHAP05111 366 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 CDK18Q07002 472 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ZBTB17Q13105 803 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 MANEALQ5VSG8 457 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 LHX8Q68G74 356 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 NLRP9Q7RTR0 991 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TMEM135Q86UB9 458 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 KLHDC8BQ8IXV7 354 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CASP10Q92851 521 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 E2F7Q96AV8 911 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 FCRL2Q96LA5 508 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 RAB3IPQ96QF0 476 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 SIKE1Q9BRV8 207 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 DRC3Q9H069 523 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 NPHS2Q9NP85 383 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 LRFN2Q9ULH4 789 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 STK38LQ9Y2H1 464 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SNX10Q9Y5X0 201 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 PCNTO95613 3336 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 H7C4K7 107 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 MATN3O15232 486 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 AMHP03971 560 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CCNB1P14635 433 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 NQO1P15559 274 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 BGNP21810 368 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 HADHAP40939 763 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ARFIP2P53365 341 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 GEMP55040 296 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CRADDP78560 199 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 PABPC1LQ4VXU2 614 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 CCDC117Q8IWD4 279 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 ATP6V0D2Q8N8Y2 350 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 STKLD1Q8NE28 680 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SEPT8Q92599 483 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ZNF669Q96BR6 464 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 C7orf26Q96N11 449 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 FCRL5Q96RD9 977 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SAR1AQ9NR31 198 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 IL37Q9NZH6 218 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SFMBT1Q9UHJ3 866 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 GGT7Q9UJ14 662 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CARD8Q9Y2G2 431 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TSC22D4Q9Y3Q8 395 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 NUP205Q92621 2012 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 MYO16Q9Y6X6 1858 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TRPA1O75762 1119 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 UNC5CO95185 931 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ATP5BP06576 529 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 ITGA2BP08514 1039 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 OR4Q2P0C623 313 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TUBP50607 506 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CSE1LP55060 971 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 MLLT6P55198 1093 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 TBX4P57082 545 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 NSUN2Q08J23 767 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBR4-202ENST00000375224 ANKRD20A4Q4UJ75 823 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 TMEM53Q6P2H8 277 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 RTL3Q8N8U3 475 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 SPPL2BQ8TCT7 592 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 C2orf15Q8WU43 125 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 DPF3Q92784 378 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 PPP2R3CQ969Q6 453 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 ERP27Q96DN0 273 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CELF6Q96J87 481 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 IL12RB2Q99665 862 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 MLPHQ9BV36 600 aaPredicted RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 MRPL9Q9BYD2 267 aaKnown RBP8.35□□□□□ -1.07
UBR4-202ENST00000375224 MYLK2Q9H1R3 596 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SIRPGQ9P1W8 387 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 CHKBQ9Y259 395 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 SHROOM3Q8TF72 1996 aa8.35□□□□□ -1.07
UBR4-202ENST00000375224 HMX2A2RU54 273 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 E9PAM4 449 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 F8W810 466 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ENPP3O14638 875 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms