RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RAMP2O60895 175 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 LIMK2P53671 638 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 OVGP1Q12889 678 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 MPP3Q13368 585 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 POLD3Q15054 466 aaPredicted RBP19.9■□□□□ 0.78
HDAC1-201ENST00000373548 MARC1Q5VT66 337 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 FYB2Q5VWT5 728 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 CNPY4Q8N129 248 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 SLC39A11Q8N1S5 342 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 OVCA2Q8WZ82 227 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 PABPC5Q96DU9 382 aaKnown RBP19.9■□□□□ 0.78
HDAC1-201ENST00000373548 IMP4Q96G21 291 aaKnown RBP19.9■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF558Q96NG5 402 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 FSD1LQ9BXM9 530 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 NPHS2Q9NP85 383 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 SIRPGQ9P1W8 387 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 CLTBP09497 229 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 SLC6A4P31645 630 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 RFC2P35250 354 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 SPRP35270 261 aaPredicted RBP19.89■□□□□ 0.77
HDAC1-201ENST00000373548 MAPKAPK2P49137 400 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 WNT3AP56704 352 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 DEFB103AP81534 67 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 DSG1Q02413 1049 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 MTA1Q13330 715 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 PARP15Q460N3 678 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 ZNF354CQ86Y25 554 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 CCDC117Q8IWD4 279 aaPredicted RBP19.89■□□□□ 0.77
HDAC1-201ENST00000373548 LGI2Q8N0V4 545 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 DCLK2Q8N568 766 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 GBP7Q8N8V2 638 aaPredicted RBP19.89■□□□□ 0.77
HDAC1-201ENST00000373548 ISL2Q96A47 359 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 RC3H2Q9HBD1 1191 aaKnown RBP19.89■□□□□ 0.77
HDAC1-201ENST00000373548 IARS2Q9NSE4 1012 aaKnown RBP19.89■□□□□ 0.77
HDAC1-201ENST00000373548 EMCNQ9ULC0 261 aa19.89■□□□□ 0.77
HDAC1-201ENST00000373548 HGSO14964 777 aaPredicted RBP19.88■□□□□ 0.77
HDAC1-201ENST00000373548 GLRA3O75311 464 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 IL1BP01584 269 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 OR1E1P30953 314 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 MAGEA12P43365 314 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 CHRNA4P43681 627 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 MAXP61244 160 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 SERINC3Q13530 473 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 PPM1JQ5JR12 505 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 STXBP5Q5T5C0 1151 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 KYAT3Q6YP21 454 aaKnown RBP19.88■□□□□ 0.77
HDAC1-201ENST00000373548 KDELC2Q7Z4H8 507 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TEX26Q8N6G2 289 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 ATXN7L3BQ96GX2 97 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TMEM169Q96HH4 297 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 MCMBPQ9BTE3 642 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 NACA2Q9H009 215 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 SNX15Q9NRS6 342 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 HSFX1Q9UBD0 423 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 ABHD14A-ACY1A0A1B0GW23 586 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 F5H5T6 163 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 GOLGA8TH3BQL2 631 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 COCHO43405 550 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 ACSL4O60488 711 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 BPGMP07738 259 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TROVE2P10155 538 aaKnown RBP eCLIP19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TYK2P29597 1187 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 ACVRL1P37023 503 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TNK2Q07912 1038 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 IL10RBQ08334 325 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 PCSK7Q16549 785 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 C5orf22Q49AR2 442 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 HECTD3Q5T447 861 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 CES4AQ5XG92 561 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TPGS2Q68CL5 300 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 PDPK2PQ6A1A2 396 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 FSTL4Q6MZW2 842 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 C16orf46Q6P387 395 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 RFWD3Q6PCD5 774 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 POTEHQ6S545 545 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TRIM42Q8IWZ5 723 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 CFAP52Q8N1V2 620 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 RFWD2Q8NHY2 731 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 CYP4F11Q9HBI6 524 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 TCAF1Q9Y4C2 921 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 YIPF1Q9Y548 306 aa19.88■□□□□ 0.77
HDAC1-201ENST00000373548 ANAPC1Q9H1A4 1944 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 H0YHG0 523 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 DNAJC8O75937 253 aaPredicted RBP19.87■□□□□ 0.77
HDAC1-201ENST00000373548 GSRP00390 522 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 ITGB8P26012 769 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 ABCG1P45844 678 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 CSE1LP55060 971 aaKnown RBP19.87■□□□□ 0.77
HDAC1-201ENST00000373548 YBEYP58557 167 aaPredicted RBP19.87■□□□□ 0.77
HDAC1-201ENST00000373548 DSC2Q02487 901 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 CCDC15Q0P6D6 951 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 BNIP1Q12981 228 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 IHHQ14623 411 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 N4BP2L1Q5TBK1 243 aaPredicted RBP19.87■□□□□ 0.77
HDAC1-201ENST00000373548 KLHDC10Q6PID8 442 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 CMC1Q7Z7K0 106 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 NUDCD3Q8IVD9 361 aa19.87■□□□□ 0.77
HDAC1-201ENST00000373548 PPHLN1Q8NEY8 458 aaKnown RBP19.87■□□□□ 0.77
HDAC1-201ENST00000373548 E2F7Q96AV8 911 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms